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. 2006 Jan 10;34(1):e6. doi: 10.1093/nar/gnj002

Table 3.

BIOREL evaluation of expression datasets

Dataset Platform and number of measurements Biological relevance (functional bias scorea) Sequence similarity bias scorea Bias scores ratio Number of selected genes
Gasch cDNA, 53 0.24 0.08 3.0 1000
Gasch cDNA, 53 0.21 0.07 3.0 2000
Gasch cDNA, 53 0.18 0.07 2.6 3000
Gasch cDNA, 53 0.19 0.08 2.4 4000
Spellman cDNA, 148 0.16 0.07 2.3 1000
Spellman cDNA, 148 0.20 0.09 2.2 2000
Spellman cDNA, 148 0.18 0.08 2.3 3000
Spellman cDNA, 148 0.17 0.08 2.1 4000
Causton Affy, 45 0.35 0.06 6.0 1000
Causton Affy, 45 0.43 0.06 7.1 2000
Causton Affy, 45 0.52 0.07 7.5 3000
Causton Affy, 45 0.50 0.06 8.3 4000

aThe bias score is a proportion of genes in the network with significantly (P < 0.01) biased associations.