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. 2006 Jan 17;103(4):976–981. doi: 10.1073/pnas.0510146103

Table 1. PCR amplification conditions for exons 1–11 of TP53 and their corresponding DHPLC analysis conditions.

Exon Primer sequences (5′-3′) PCR product size, bp PCR Tm, °C DHPLC denaturating temperature, °C/gradient initial buffer B, %
1 cacagctctggcttgcaga 442 66 60/58, 64/52
agcgattttcccgagctga
2 agctgtctcagacactggca 317 64* 65/47
gagcagaaagtcagtcccatg
3-4 agacctatggaaactgtgagtgga 631 56* N/A
gaagcctaagggtgaagagga
5-6 cgctagtgggttgcagga 550 64 61/57, 66/49
cactgacaaccacccttaac
7 ctgcttgccacaggtctc 283 64 58/54, 66/46
tggatgggtagtagtatggaag
8-9 gttgggagtagatggagcct 455 64 57/57, 63/50
ggcattttgagtgttagactg
10 ctcaggtactgtgtatatacttac 351 59 57/55, 65/46
atactacgtggaggcaagaat
11 tcccgttgtcccagcctt 476 58 56/58, 62/53
taacccttaactgcaagaacat
*

With the addition of 0.5 × Q (Qiagen PCR amplification kit).