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. 2026 Jun 30;12(3):137–150. doi: 10.52601/bpr.2025.250014

Table 2. Troubleshooting guide for Western blot issues.

Problem Potential causes Solutions

Weak or no signal

(1) Inefficient transfer to nitrocellulose

(2) Low antibody binding

(3) Excessive washing

(1) Extend transfer time to 1.5 h, or increase methanol content to 25% in transfer buffer

(2) Optimize primary antibody dilution (e.g., 1:2000) and incubate for 48 h at 4°C

(3) Reduce TBST wash time to 3−4 min per wash

High background noise

(1) Incomplete blocking

(2) Cross-contamination during washing

(1) Block with 5% BSA instead of milk for phospho-specific antibodies

(2) Increase TBST washing frequency (e.g., 3 × 10 min) and use fresh buffers

Uneven band intensity

(1) Uneven gel loading

(2) Poor membrane contact

(1) Load equal protein amounts (e.g., 20–25 μL per lane)

(2) Ensure even pressure in transfer sandwich