| GWAS | Genome-Wide Association Study |
| LD | Linkage Disequilibrium |
| SNP | Single-Nucleotide Polymorphism |
| WGS | Whole-Genome Sequencing |
| QC | Quality Control |
| MAF | Minor Allele Frequency |
| HWE | Hardy–Weinberg Equilibrium |
| PCA | Principal Component Analysis |
| PC | Principal Component |
| VCF | Variant Call Format |
| DR2 | Imputation Accuracy Metric (Dosage R-squared) |
| GRM | Genomic Relationship Matrix |
| GBLUP | Genomic Best Linear Unbiased Prediction |
| PIP | Posterior Inclusion Probability |
| SuSiE-RSS | Sum of Single Effects model using Regression with Summary Statistics |
| R2 | Coefficient of Determination |
| PCC | Pearson Correlation Coefficient |
| MSE | Mean Squared Error |
| AUC | Area Under the Curve |
| GO | Gene Ontology |
| KEGG | Kyoto Encyclopedia of Genes and Genomes |
| FDR | False Discovery Rate |
| BH | Benjamini–Hochberg procedure |