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. 2002 Dec;70(12):6853–6859. doi: 10.1128/IAI.70.12.6853-6859.2002

TABLE 1.

Primers and amplicon sizes for loci included in the PCR assay

Locus Primer designation Nucleotide sequence of primer Amplicon size(s) (bp)
bfpA bfpA-F11 5′-GTCTGCGTCTGATTCCAATA-3′ 408, 414
bfpA-R1 5′-TCAGCAGGAGTAATAGC-3′
toxB toxB.911F 5′-ATACCTACCTGCTCTGGATTGA-3′ 602
toxB.1468R 5′-TTCTTACCTGATCTGATGCAGC-3′
stx1 1A.251F 5′-GGGATAGATCCAGAGGAAGG-3′ 624
1A.832R 5′-CCGGACACATAGAAGGAAACTC-3′
stx2 2A.506F 5′-CTGGCGTTAATGGAGTTCAG-3′ 383
2A.848R 5′-CCTGTCGCCAGTTATCTGAC-3′
eae eae-F1 5′-ACTCCGATTCCTCTGGTGAC-3′ 389
eae-R3 5′-TCTTGTGCGCTTTGGCTT-3′
terC terC.106F 5′-TATGCACCGTGATGACAAGC-3′ 210
terC.275R 5′-GGCGAACCAGGAGAAGATTG-3′
ureA ureA.109F 5′-TAACTATCCCGAATCCGTGG-3′ 146
ureA.213R 5′-GGGATCATTTCTGGTATGCCT-3′
iha iha.138F 5′-ACGCAGCCGCCAGTGTT-3′ 186
iha.282R 5′-CCATCAATCAGTATCAGCGTGTAA-3′
invG invG.481F 5′-TGACCTGGTCGTTAATGCTG-3′ 133
invG.572R 5′-CGCCACGTAACTCATAAGTCC-3′
spaP spaP.143F 5′-GGACTTCAGCAAGTGCCATC-3′ 173
spaP.275R 5′-ACCACTCATGCCTGTCTCAA-3′
Z4326 ShET.1137F 5′-TCATGCAGACGCAATAAAGG-3′ 125
ShET.1221R 5′-GATACGCAAGAAGTAATCCTGG-3′
fyuA fyuA.924F 5′-GCAGCAGCAGCATTATTCG-3′ 495
mdh mdh.269F 5′-GGTATGGATCGTTCCGACCT-3′ 304
mdh.530R 5′-GGCAGAATGGTAACACCAGAGT-3′