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. 2002 Jun;22(11):3707–3716. doi: 10.1128/MCB.22.11.3707-3716.2002

TABLE 1.

Oligonucleotides used for Northern analyses

Target RNAa Complementary position in RNA sequence Sequence (5′-3′)
Asn (GUU) 73-56 CTCCTCCCGTTGGATTCG
Asp (GUC) 72-55 CTTCCCGGCCGGGAATTG
Cys (GCA) 72-55 AGGACCCACCCGGGTTTG
Gln (UUG) 72-58 GTGGTGGTCCTACCAGGAT
Glu (CUC) 72-55 TTCCGGTGCCGGGGATCG
Ile (UAU) 72-54 TGCTCCCGGCGGGTTCGAA
Leu (AAG) 59-42 ACGCCCTCGGAAGGATTG
Leu (CAA) 62-45 CCCACGCCTACGAATAGA
Leu (CAG) 56-39 CCTCCGGAGAGATGACGA
Leu (UAG) 57-40 ACGCCCCTAGAGACCAGA
Lys (CUU, UUU) 73-50 GTGGCACCCCCCGTGGGGCT CGAACCCA
Met-i (CAU) 64-47 GTTGGTTTCGATCCAACG
Met-e (CAU) 65-48 GTGAGGCTCGAACTCACG
Phe (GAA) 73-62 AGGTGTGCCGCGACCCG
Tyr (GUA) 70-53 TTCCGGCCGGAATCGAAC
12S rRNAb 869-848 AGGAGAGTAGGACTTGCCCT
gCYb (560A)c 47-28 TTATCCTCCCCATTACTCAG
Leu∗ (CAA)d 61-43 CCACGCCTTTGAAGAGAAG
a

tRNAs are specified by the amino acid and the anticodon. Predicted secondary structures of the tRNAs are shown in Fig. 2.

b

Mitochondria-encoded large subunit ribosomal RNA.

c

Mitochondria-encoded guide RNA.

d

Used to detect tagged tRNALeu(CAA) in transgenic cells (Fig. 6).