| ACN-HCOOH | Acidified acetonitrile |
| AGO2 | Argonaute RISC catalytic component 2 |
| A → I | Adenosine-to-inosine editing |
| α-KG | α-ketoglutarate |
| ALL | Acute lymphoblastic leukemia |
| AML | Acute myeloid leukemia |
| AZA | Azacitidine |
| BMMCs | Bone marrow mononuclear cells |
| CoA | Acetyl-coenzyme A |
| CLEC12B | C-Type lectin domain family 12 member B |
| CMML | Chronic myelomonocytic leukemia |
| Co-A | Coenzyme A |
| CTCF | CCCTC-binding factor |
| DEA | Differential expression analysis |
| dPCR | Digital polymerase chain reaction |
| EPO | Erythropoietin |
| ESI | Electrospray ionization system |
| FASTQ | Raw sequencing data |
| FBXL5 | F-box and leucine-rich repeat protein 5 |
| GAPDH | Glyceraldehyde-3-phosphate dehydrogenase |
| GATA2 | Globin transcription factor 2 |
| Gm | 2′-O-Methyl-guanosine RNA modification |
| GO | Gene ontology |
| GSEA | Gene set enrichment analysis |
| HMAs | Hypomethylating agents |
| HOXA | Homeobox A cluster |
| HOXB | Homeobox B cluster |
| HR-MDS | Higher-risk MDS |
| HSPCs | Hematopoietic stem and progenitor cells |
| IWG | International Working Group |
| KCNB1 | Potassium voltage-gated channel subfamily B member 1 |
| LC | Liquid chromatography |
| LC-MS/MS | Liquid chromatography combined with mass spectrometry |
| lncRNAs | Long non-coding ribonucleic acids |
| LSCs | Leukemic stem cells |
| m1A | N1-methyladenosine RNA modification |
| m6A | N6-methyladenosine RNA modification |
| m5C | 5-methylcytosine RNA modification |
| MDS | Myelodysplastic syndromes |
| MDS-EB | Myelodysplastic syndromes with an excess of marrow blasts |
| MDS-MLD | Myelodysplastic syndromes with multilineage dysplasia |
| METTL14 | Methyltransferase 14, m6A methyltransferase |
| miRNA | MicroRNA |
| MRM | Multiple reaction monitoring |
| mtDNA | Mitochondrial DNA |
| NAD+/NADH | Nicotinamide adenine dinucleotide |
| nDNA | Nuclear deoxyribonucleic acid |
| NES | Normalized enrichment score |
| NGS | Next generation sequencing |
| OXPHOS | Oxidative phosphorylation |
| PCR | Polymerase chain reaction |
| PGE2 | Prostaglandin E2 |
| RIS | Integrity Scores |
| SAM | S-Adenosyl methionine |
| SNAI1 | Snail family transcriptional repressor 1 |
| STAG2 | STAG2 cohesin complex component |
| SF3B1 | Splicing factor 3b subunit 1 |
| TET1-3 | Ten-eleven translocation 1–3 enzymes |
| TRIM37 | Tripartite motif containing 37 |
| U2AF1 | U2 small nuclear RNA auxiliary factor 1 |
| UMIs | Unique molecular identifiers |