| TRIM28 | Tripartite motif-containing 28 |
| GSCA | Gene Set Cancer Analysis |
| Bc-GenExMiner | Breast Cancer Gene-Expression Miner |
| RTK | Receptor tyrosine kinase |
| KRAB | Krüppel-associated box |
| KAP1 | KRAB-associated protein 1 |
| TIF1β | Transcriptional intermediary factor 1β |
| EMT | Epithelial-to-mesenchymal transition |
| PPS | Post-progression survival |
| OS | Overall survival |
| DMFS | Distant metastases-free survival |
| RFS | Relapse-free survival |
| TMB | Tumour mutational burden |
| HR | Hazard ratio |
| CI | Confidence interval |
| NPI | Nottingham Prognostic Index |
| PH | Proportional hazards |
| GDSC | Genome of Drug Sensitivity in Cancer |
| METABRIC | Molecular Taxonomy of Breast Cancer International Consortium |
| TCGA | The Cancer Genome Atlas |
| TCGA-BRCA | The Cancer Genome Atlas Breast Cancer dataset |
| TIMER2.0 | Tumor IMmune Estimation Resource version 2.0 |
| LumA | Luminal A |
| LumB | Luminal B |
| FDR | False discovery rate |