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Performance of baseline models of F1-score and mean reciprocal rank using relaxed string matching (relaxed) and Jaccard Distance–based method (Jaccard).
| Models | F1-score (relaxed), mean (SD) | F1-score (Jaccard), mean (SD) | MRRa (SD), relaxed | MRR (SD), Jaccard |
| MedJEx | 0.120 (0.027) | 0.138 (0.031) | —b | — |
| BioClinical-Modern BERT | 0.076 (0.079) | 0.087 (0.086) | 0.087 (0.146) | 0.098 (0.151) |
aMRR: mean reciprocal rank.
bNot available.
