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. 2002 Dec;68(12):6283–6291. doi: 10.1128/AEM.68.12.6283-6291.2002

TABLE 2.

Oligonucleotide primersa

Primer or primer pair Nucleotide sequence Amplicon Size (bp)
comAUF251(Xba) 5′-CCC CCC TCT AGA CAA AAA TCA TAG CAA TAT-3′ comAU 986
comAUR1236(Sal) 5′-CCC CCC GTC GAC ATA AAT AAC TTG TTT CAT-3′
comADF3482(Eco) 5′-CCC CCC GAA TTC ATT ATA ACC TGT TTA ATT-3′ comAD 834
comADR4315(Sma) 5′-CCC CCC CCC GGG TTT GCT ATT TTT CTT AGA-3′
comCUF6917(Bam) 5′-CCC CCC GGA TCC GAT TTA CCA TCA AAT CTT-3′ comCU 659
comCUR7575(Hind) 5′-CAC AAG CTT TGG GAA AAT-3′
comCDF7781(Sma) 5′-CCC CCC CCC GGG TCC TTA GGA CAC ATA ATG-3′ comCD 676
comCDR8456(Bam) 5′-CCC CCC GGA TCC AGC AAA TCT GAA CAA GCA-3′
comDUF4597(Sma) 5′-CCC CCC CCC GGG GTT CAA CTT CTA TCA TTT-3′ comDU 1523
comDUR6124(Bam) 5′-CCC CCC GGA TCC ACC ATT TGA AAG TAT CAT-3′
comDDF7384(Bam) 5′-CCC CCC GGA TCC TCA TTT ATT CAA GCA ACT-3′ comDD 483
comDDR7867(Xba) 5′-CCC CCC TCT AGA AAT GGT AGC TAT TTT GT-3′
comEUF4801(Bam) 5′-CCC CCC GGA TCC TGG CTA TTG TTT TTG TGA-3′ comEU 622
comEUR5346(Xba) 5′-CCC CCC TCT AGA TCA TTA TTT CTC CTT TAA-3′
comEDF5926(Sma) 5′-CCC CCC CCC GGG AGA GAC TTT TTC AGT GCC-3′ comED 545
comEDR6587(Bam) 5′-CCC CCC GGA TCC GGT AGT ATA GAA GCA TAG-3′
relA-spoTF3106(Bam) 5′-CCC CCC GGA TCC TTA CAT GGT GAG ATT TA-3′ relA-spoTI 640
relA-spoTR3745(Hind) 5′-CCC CCC AAG CTT GTT TTG AGC TTA GCT GT-3′
a

Endonuclease recognition sequences are underlined.