TABLE 2.
Oligonucleotide primersa
Primer or primer pair | Nucleotide sequence | Amplicon | Size (bp) |
---|---|---|---|
comAUF251(Xba) | 5′-CCC CCC TCT AGA CAA AAA TCA TAG CAA TAT-3′ | comAU | 986 |
comAUR1236(Sal) | 5′-CCC CCC GTC GAC ATA AAT AAC TTG TTT CAT-3′ | ||
comADF3482(Eco) | 5′-CCC CCC GAA TTC ATT ATA ACC TGT TTA ATT-3′ | comAD | 834 |
comADR4315(Sma) | 5′-CCC CCC CCC GGG TTT GCT ATT TTT CTT AGA-3′ | ||
comCUF6917(Bam) | 5′-CCC CCC GGA TCC GAT TTA CCA TCA AAT CTT-3′ | comCU | 659 |
comCUR7575(Hind) | 5′-CAC AAG CTT TGG GAA AAT-3′ | ||
comCDF7781(Sma) | 5′-CCC CCC CCC GGG TCC TTA GGA CAC ATA ATG-3′ | comCD | 676 |
comCDR8456(Bam) | 5′-CCC CCC GGA TCC AGC AAA TCT GAA CAA GCA-3′ | ||
comDUF4597(Sma) | 5′-CCC CCC CCC GGG GTT CAA CTT CTA TCA TTT-3′ | comDU | 1523 |
comDUR6124(Bam) | 5′-CCC CCC GGA TCC ACC ATT TGA AAG TAT CAT-3′ | ||
comDDF7384(Bam) | 5′-CCC CCC GGA TCC TCA TTT ATT CAA GCA ACT-3′ | comDD | 483 |
comDDR7867(Xba) | 5′-CCC CCC TCT AGA AAT GGT AGC TAT TTT GT-3′ | ||
comEUF4801(Bam) | 5′-CCC CCC GGA TCC TGG CTA TTG TTT TTG TGA-3′ | comEU | 622 |
comEUR5346(Xba) | 5′-CCC CCC TCT AGA TCA TTA TTT CTC CTT TAA-3′ | ||
comEDF5926(Sma) | 5′-CCC CCC CCC GGG AGA GAC TTT TTC AGT GCC-3′ | comED | 545 |
comEDR6587(Bam) | 5′-CCC CCC GGA TCC GGT AGT ATA GAA GCA TAG-3′ | ||
relA-spoTF3106(Bam) | 5′-CCC CCC GGA TCC TTA CAT GGT GAG ATT TA-3′ | relA-spoTI | 640 |
relA-spoTR3745(Hind) | 5′-CCC CCC AAG CTT GTT TTG AGC TTA GCT GT-3′ |
Endonuclease recognition sequences are underlined.