TABLE 2.
Oligonucleotide primersa
| Primer or primer pair | Nucleotide sequence | Amplicon | Size (bp) |
|---|---|---|---|
| comAUF251(Xba) | 5′-CCC CCC TCT AGA CAA AAA TCA TAG CAA TAT-3′ | comAU | 986 |
| comAUR1236(Sal) | 5′-CCC CCC GTC GAC ATA AAT AAC TTG TTT CAT-3′ | ||
| comADF3482(Eco) | 5′-CCC CCC GAA TTC ATT ATA ACC TGT TTA ATT-3′ | comAD | 834 |
| comADR4315(Sma) | 5′-CCC CCC CCC GGG TTT GCT ATT TTT CTT AGA-3′ | ||
| comCUF6917(Bam) | 5′-CCC CCC GGA TCC GAT TTA CCA TCA AAT CTT-3′ | comCU | 659 |
| comCUR7575(Hind) | 5′-CAC AAG CTT TGG GAA AAT-3′ | ||
| comCDF7781(Sma) | 5′-CCC CCC CCC GGG TCC TTA GGA CAC ATA ATG-3′ | comCD | 676 |
| comCDR8456(Bam) | 5′-CCC CCC GGA TCC AGC AAA TCT GAA CAA GCA-3′ | ||
| comDUF4597(Sma) | 5′-CCC CCC CCC GGG GTT CAA CTT CTA TCA TTT-3′ | comDU | 1523 |
| comDUR6124(Bam) | 5′-CCC CCC GGA TCC ACC ATT TGA AAG TAT CAT-3′ | ||
| comDDF7384(Bam) | 5′-CCC CCC GGA TCC TCA TTT ATT CAA GCA ACT-3′ | comDD | 483 |
| comDDR7867(Xba) | 5′-CCC CCC TCT AGA AAT GGT AGC TAT TTT GT-3′ | ||
| comEUF4801(Bam) | 5′-CCC CCC GGA TCC TGG CTA TTG TTT TTG TGA-3′ | comEU | 622 |
| comEUR5346(Xba) | 5′-CCC CCC TCT AGA TCA TTA TTT CTC CTT TAA-3′ | ||
| comEDF5926(Sma) | 5′-CCC CCC CCC GGG AGA GAC TTT TTC AGT GCC-3′ | comED | 545 |
| comEDR6587(Bam) | 5′-CCC CCC GGA TCC GGT AGT ATA GAA GCA TAG-3′ | ||
| relA-spoTF3106(Bam) | 5′-CCC CCC GGA TCC TTA CAT GGT GAG ATT TA-3′ | relA-spoTI | 640 |
| relA-spoTR3745(Hind) | 5′-CCC CCC AAG CTT GTT TTG AGC TTA GCT GT-3′ |
Endonuclease recognition sequences are underlined.