| 4D-DIA | 4-Dimensional Data-Independent Acquisition |
| AMPK | AMP-Activated Protein Kinase |
| AP-2 | Adaptor Protein Complex 2 |
| BCS | Body Condition Score |
| DIM | Days (or Day) in Milk |
| dSCH | Delayed Subclinical Hypocalcemia |
| HC | Healthy Control |
| HPLC | High-Performance Liquid Chromatography |
| KEGG | Kyoto Encyclopedia of Genes and Genomes |
| KNN | K-Nearest Neighbor |
| LC-MS/MS | Liquid Chromatography–Tandem Mass Spectrometry |
| MLCK | Myosin Light Chain Kinase |
| OPLS-DA | Orthogonal Partial Least Squares Discriminant Analysis |
| PCA | Principal Component Analysis |
| PPI | Protein–Protein Interaction |
| pSCH | Persistent Subclinical Hypocalcemia |
| ROCK | Rho-Associated Kinase |
| TCA | Tricarboxylic Acid (cycle) |
| TMR | Total Mixed Ration |
| TRPV5 | Transient Receptor Potential Vanilloid 5 |
| tSCH | Transient Subclinical Hypocalcemia |