TABLE 1.
Oligonucleotide primers
Target gene | GenBank accession no. | Primer | Primer sequence | Purpose |
---|---|---|---|---|
hlb | X61716 | hlb-2 | AGCTTCAAACTTAAATGTCA | Multiplex PCR |
hlb-527 | CCGAGTACAGGTGTTTGGTA | |||
sak | AF424783 | sak-for | GTGCATCAAGTTCATTCGAC | Multiplex PCR, Northern probe |
sak-rev | TAAGTTGAATCCAGGGTTTT | |||
φ13 integrase | AF424783 | φ13int-for | GCTTTGAAATCAGCCTGTAG | Multiplex PCR |
φ13 attP | AF424783 | attPst-for | TCTAGCTTTTGGGGTGTACATTCC | DNA standard |
attPst-rev | GCTTTGAAATCAGCCTGTAGAG | |||
attP-for | TTTTATTTTATATGGGGTATTATTGA | Quantitative LightCycler PCR | ||
attP-rev | GTGTATTCTCATTTGTTAGAAGAAAA | |||
gyrB | D10489 | gyrB-219 | TTATGGTGCTGGGCAAATACA | DNA standard |
gyrB-864 | GTACGATTTAATACCGCCCTCATA | |||
gyrB-297 | TTAGTGTGGGAAATTGTCGATAAT | Quantitative LightCycler PCR | ||
gyrB-547 | AGTCTTGTGACAATGCGTTTACA | |||
recA | L25893 | recA-153 | AGATAATGCGCTAGGTGTAGGTGG | Northern probe |
recA-786 | AGCTACTCTAAATGGTGGTGCCAC |