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. 2006 Jan;50(1):185–195. doi: 10.1128/AAC.50.1.185-195.2006

TABLE 1.

Primers used for cloning and sequencing of Atlantic salmon asCATH_1 and asCATH_2 and rainbow trout rtCATH_2

Use and gene Primer Nucleotide sequence (5′→3′)
cDNA cloning
    RACE APT CCAGACTCGTGGCTGATGCA(T)16Va
AP CCAGACTCGTGGCTGATGCA
RAP TGCCACGCGTCGACTAGTAC(G)16
UAP TGCCACGCGTCGACTAGTAC
    asCATH_1 asCATH_1_F0 GAATCAGACATGAAGATGAA
asCATH_1_F1 TGGCAGCATTCGTTGTCGTG
asCATH_1_F2 GATTTATCACAGATCAACGTGA
asCATH_1_R0 TTATGACATTTCTTTGATAG
asCATH_1_R1 TCCATCACGTTGATCTGTGA
asCATH_1_R2 CCTCAGGCGACCAATTAAGG
    asCATH_2 asCATH_2_F0 ATCAGACATGAAGATGAAGGC
asCATH_2_F1 ATGCCAGTACTGTGCACT
asCATH_2_F2 TCCAAGGGGGGTTGGAGAGG
asCATH_2_R0 GTTGCATGTTCAATCATTAACC
asCATH_2_R1 ACCTTGGTCTCTTCCGCTAGC
asCATH_2_R2 CCTCTCCAACCCCCCTTGGA
    rtCATH_2 as_rt_F1 TGAATACAGAGGATGTGGACCA
as_rt_F2 CCATGCCCTCTGAAGAAAAATG
rtCATH_1_F4 CTGACCTGTCTACATTTGTTTG
rtCATH_1_R1 GCGATTTCCATCACTGTGATCTCT
rtCATH_2_F0 ATCAGACATGAAGATGAAGGC
rtCATH_2_R0 CTCAAGGTTTCATGTTCACCCA
rtCATH_2_R1 TGTTCGATGCAGGGAGAGTT
rtCATH_2_R2 CCACTCCCAGGACGACCTCT
Genomic DNA cloning
    asCATH_1 asCATH_1_F0 GAATCAGACATGAAGATGAA
asCATH_1_R0 TTATGACATTTCTTTGATAG
    asCATH_2 asCATH_2_F0 ATCAGACATGAAGATGAAGGC
asCATH_2_R0 GTTGCATGTTCAATCATTAACC
    rtCATH_2 rtCATH_2_F0 ATCAGACATGAAGATGAAGGC
rtCATH_2_R0 CTCAAGGTTTCATGTTCACCCA
Expression analysis
    rtCATH_1 rtCATH_1_F4 CTGACCTGTCTACATTTGTTTG
rtCATH_1_R1 GCGATTTCCATCACTGTGATCTCT
    rtCATH_2 rtCATH_2_F1 ATTGGCAACACCCTCAACACT
rtCATH_2_R0 CTCAAGGTTTCATGTTCACCCA
a

V, A, C, or G.