TABLE 1.
Use and gene | Primer | Nucleotide sequence (5′→3′) |
---|---|---|
cDNA cloning | ||
RACE | APT | CCAGACTCGTGGCTGATGCA(T)16Va |
AP | CCAGACTCGTGGCTGATGCA | |
RAP | TGCCACGCGTCGACTAGTAC(G)16 | |
UAP | TGCCACGCGTCGACTAGTAC | |
asCATH_1 | asCATH_1_F0 | GAATCAGACATGAAGATGAA |
asCATH_1_F1 | TGGCAGCATTCGTTGTCGTG | |
asCATH_1_F2 | GATTTATCACAGATCAACGTGA | |
asCATH_1_R0 | TTATGACATTTCTTTGATAG | |
asCATH_1_R1 | TCCATCACGTTGATCTGTGA | |
asCATH_1_R2 | CCTCAGGCGACCAATTAAGG | |
asCATH_2 | asCATH_2_F0 | ATCAGACATGAAGATGAAGGC |
asCATH_2_F1 | ATGCCAGTACTGTGCACT | |
asCATH_2_F2 | TCCAAGGGGGGTTGGAGAGG | |
asCATH_2_R0 | GTTGCATGTTCAATCATTAACC | |
asCATH_2_R1 | ACCTTGGTCTCTTCCGCTAGC | |
asCATH_2_R2 | CCTCTCCAACCCCCCTTGGA | |
rtCATH_2 | as_rt_F1 | TGAATACAGAGGATGTGGACCA |
as_rt_F2 | CCATGCCCTCTGAAGAAAAATG | |
rtCATH_1_F4 | CTGACCTGTCTACATTTGTTTG | |
rtCATH_1_R1 | GCGATTTCCATCACTGTGATCTCT | |
rtCATH_2_F0 | ATCAGACATGAAGATGAAGGC | |
rtCATH_2_R0 | CTCAAGGTTTCATGTTCACCCA | |
rtCATH_2_R1 | TGTTCGATGCAGGGAGAGTT | |
rtCATH_2_R2 | CCACTCCCAGGACGACCTCT | |
Genomic DNA cloning | ||
asCATH_1 | asCATH_1_F0 | GAATCAGACATGAAGATGAA |
asCATH_1_R0 | TTATGACATTTCTTTGATAG | |
asCATH_2 | asCATH_2_F0 | ATCAGACATGAAGATGAAGGC |
asCATH_2_R0 | GTTGCATGTTCAATCATTAACC | |
rtCATH_2 | rtCATH_2_F0 | ATCAGACATGAAGATGAAGGC |
rtCATH_2_R0 | CTCAAGGTTTCATGTTCACCCA | |
Expression analysis | ||
rtCATH_1 | rtCATH_1_F4 | CTGACCTGTCTACATTTGTTTG |
rtCATH_1_R1 | GCGATTTCCATCACTGTGATCTCT | |
rtCATH_2 | rtCATH_2_F1 | ATTGGCAACACCCTCAACACT |
rtCATH_2_R0 | CTCAAGGTTTCATGTTCACCCA |
V, A, C, or G.