AUC	area under the curve
BH	Benjamini–Hochberg
CAI	codon adaptation index
CDS	coding sequence
CK	control condition
CPM	counts per million
DEG	differentially expressed gene
FC	fer control
FDR	false discovery rate
FER	FERONIA
FS	fer salt
GO	Gene Ontology
GSEA	gene set enrichment analysis
logCPM	log counts per million
nMFE	normalized minimum free energy
NES	normalized enrichment score
PCA	principal component analysis
Ribo-seq	ribosome sequencing
RNA-seq	RNA sequencing
RPF	ribosome-protected fragment
RPKM	reads per kilobase per million mapped reads
S150	150 mM NaCl salt treatment
TE	translational efficiency
TMM	trimmed mean of M-values
uORF	upstream open reading frame
UTR	untranslated region
WC	WT control
WS	WT salt (150 mM NaCl)
WT	wild-type