TABLE 1.
Summary of Rap-Phr ORF annotations in two B. anthracis sequenced genomes
|
B. anthracis A2012
|
B. anthracis Ames
|
||
|---|---|---|---|
| Accession no. | ORF | Accession no. | ORF |
| NC_003995 | BA3790-3791 | NC_003997 | BA3284-3285 |
| NC_003995 | BA4060a/4061-4062 | NC_003997 | BA3569a-3570 |
| NC_003995 | BA1582d | NC_003997 | BA1017-1018 |
| NC_003995 | BA3016c-3015 | NC_003997 | BA2522d |
| NC_003995 | BA4239/4240b,d | NC_003997 | BA3760-3759 |
| NC_003980 | BXA0205d,e | NC_007322 | GBAA_pXO1_0205d |
a
This ORF is interrupted by a stop codon in both organisms. (This is not a sequencing error.)
b
This ORF is frameshifted in the A2012 strain only. (This could be a sequencing error.)
c
This ORF is missing 198 amino acids at the amino-terminal end due to a frameshift. (This could be a sequencing error, since the clone we recovered from strain 34F2 does not have this error.)
d
In the database, these ORFs do not have an annotated phr gene associated with them.
e
This gene is called ORF136 by Okinaka et al. (32).