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. 2006 Jan;188(2):515–524. doi: 10.1128/JB.188.2.515-524.2006

TABLE 2.

Summary of activities of mutant Ω4406 promoters

Promoter assayed Avg maximum β-galactosidase specific activity during developmenta ± SD % Control activity measured in the same experimentb ± SD
Vector (no insert) 16 ± 5
    bp −533 to 485 90 ± 32 100 ± 36
Deletions
    bp −100 to 485 368 ± 24 476 ± 7
    bp −100 to 320 272 ± 35 346 ± 13
    bp −100 to 251 182 ± 12 205 ± 7
    bp −100 to 182 220 ± 50 244 ± 23
    bp −100 to 140 199 ± 30 247 ± 15
    bp −100 to 50 57 ± 6 55 ± 11
Mutations in the C box-like sequence
    CATCGTG −55 to −49 ACGATGT 31 ± 10 11 ± 32
    C −55 A 161 ± 3 59 ± 2
    A −54 C 797 ± 199 293 ± 25
    T −53 G 24 ± 9 9 ± 38
    C −52 A 176 ± 34 65 ± 19
    G −51 T 33 ± 4 12 ± 12
    T −50 G 98 ± 22 36 ± 22
    G −49 T 568 ± 93 209 ± 16
Mutations farther upstream
    T −56 G 350 ± 6 129 ± 2
    GTC −59 to −57 TGA 160 ± 25 59 ± 16
    GAACC −64 to −60 TCCAA 67 ± 22 25 ± 32
    C −61 A 95 ± 31 35 ± 33
    GGACA −69 to −65 TTCAC 835 ± 175 307 ± 21
    GGCGTTTCA −90 to −82 TTATGGGAC 421 ± 23 155 ± 5
a

The maximum β-galactosidase specific activity in nanomoles of o-nitrophenyl phosphate per minute per milligram of protein (average ± 1 standard deviation) is listed for three independently isolated M. xanthus transformants (one determination each), except in the case of the vector control (one transformant, seven determinations) and the deletion with Ω4406 DNA from bp −100 to 320 (three transformants, two determinations each). Samples were assayed at 0, 6, 12, 18, 24, 30, 36, and 48 h during development.

b

Controls were included in each experiment. For the deletions, the controls were Ω4406 DNA from bp −533 to 485 and the vector with no insert. The maximum for each deletion is expressed as a percentage of the maximum observed for bp −533 to 485 in the same experiment, after subtraction from both values of the maximum observed for vector alone in that experiment. Likewise, the maximum for each mutation is expressed as a percentage of the maximum observed for bp −100 to 320 in the same experiment, after subtraction from both values of the maximum observed for vector alone in that experiment. The average percentage ±1 standard deviation is listed.