TABLE 1.
Phage | Genome size (bp) | % GC | Predicted genes | % Coding | Gene density (genes/kbp) | No. of genes with:
|
Avg gene size (nt) | ||
---|---|---|---|---|---|---|---|---|---|
Putative function | Unknown function | NDM | |||||||
F10 | 39,199 | 62.1 | 80 | 96.2 | 2.04 | 25 | 55 | 49 | 193 |
PA73 | 42,999 | 53.6 | 75 | 96.9 | 1.74 | 12 | 63 | 54 | 226 |
119X | 43,365 | 44.9 | 56 | 94.3 | 1.29 | 3 | 53 | 3 | 258 |
PA11 | 49,639 | 44.8 | 71 | 90.7 | 1.43 | 18 | 53 | 38 | 222 |
M6 | 59,446 | 64.5 | 110 | 96.3 | 1.85 | 13 | 97 | 80 | 261 |
F8 | 66,015 | 54.9 | 109 | 93.4 | 1.65 | 17 | 92 | 74 | 226 |
PA7 | 72,009 | 55 | 116 | 95 | 1.61 | 15 | 101 | 87 | 246 |
PA16 | 72,010 | 55 | 101 | 94.4 | 1.4 | 16 | 85 | 73 | 246 |
SD1-M | 281,083 | 36.9 | 367 | 91.1 | 1.31 | 32 | 335 | 66 | 233 |
phiCTX | 35,580 | 62.6 | 47 | 91.3 | 1.32 | 29 | 18 | 12 | 233 |
D3112 | 37,611 | 64.3 | 55 | 93.8 | 1.46 | 16 | 39 | 17 | 215 |
B3 | 38,439 | 63.2 | 59 | 97.1 | 1.53 | 21 | 38 | 18 | 216 |
phiKMV | 42,519 | 62.3 | 48 | 90.1 | 1.13 | 13 | 35 | 27 | 269 |
PaP2 | 43,783 | 45.4 | 58 | 92.4 | 1.32 | 2 | 56 | 49 | 249 |
PaP3 | 45,503 | 52.2 | 71 | 91.6 | 1.56 | 18 | 53 | 71 | 197 |
D3 | 56,425 | 57.8 | 95 | 89.1 | 1.68 | 29 | 66 | 40 | 179 |
F116 | 65,195 | 63.2 | 70 | 92.9 | 1.07 | 22 | 48 | 32 | 289 |
phiKZ | 280,334 | 36.8 | 306 | 87.1 | 1.09 | 31 | 275 | 260 | 266 |
Total | 1,371,154 | 1,894 | 332 | 1,562 | 1,050 | ||||
Average | 54.4 | 93.0 | 1.47 | 235 |
NDM, no database match; nt, nucleotides.