Table 1.
Summary statistics of ChimerDB
| Data source | Fusion cases | Genesa | mRNA | EST |
|---|---|---|---|---|
| Transcript mappingb | ||||
| Translocation | 355 | 638 | 159 | 258 |
| CoTIS | 337 | 674 | 223 | 396 |
| PubMed literature | 254 | 286 (76) | ||
| Sanger CGP | 257 | 346 (80) | ||
| OMIM records | 320 | 597 (66) | ||
| Mitelman breakpoint | 144 | 158 (54) | ||
| Atlas chromosomes | 307 (61) | |||
| Total (non-redundant) | 1258 | 1777 | 381 | 654 |
| Known genes | 1009 | 1528 | ||
| EST clustersc | 249 | 249 | ||
aNumbers in the parentheses indicate common genes with translocation data.
bTranscript mapping data include EST clusters as well as known genes.
cEST clusters come from 151 translocation and 98 CoTIS cases.