TABLE 4.
High-scoring (>85%) OVO nonamers in control sequences
Chromosome arm |
N sampled |
Average | SD | Maximum | Median |
---|---|---|---|---|---|
Random 100-bp sequences | |||||
X | 1000 | 0.67 | 0.98 | 11 | 0 |
2L | 1000 | 0.64 | 0.89 | 6 | 0 |
2R | 1000 | 0.69 | 0.87 | 5 | 0 |
3L | 1000 | 0.64 | 0.92 | 7 | 0 |
3R | 1000 | 0.66 | 0.89 | 5 | 0 |
5′-UTR sequencesa | |||||
X | 1748 | 0.85 | 0.64 | 4.2 | 0.8 |
2L | 1757 | 0.77 | 0.61 | 4.3 | 0.7 |
2R | 2051 | 0.84 | 0.68 | 5.4 | 0.8 |
3L | 1921 | 0.80 | 0.66 | 5.2 | 0.7 |
3R | 2481 | 0.83 | 0.65 | 5.8 | 0.8 |
Core promoter sequencesb | |||||
Allc | 1941 | 1.02 | 1.05 | 6 | 1 |
Adjusted for 100-bp length, sequences <100 bp excluded.
Trimmed to 100 bp centered on the transcription start site.
Pooled to increase sample size.