Table 2.
ESTs and genes mapped to the YAC/BAC contigs in this study
| NCBI No (GeneMap '99) | Aliases or synonyms | UniGene No. | Genbank Accession No. | Image Clone ID | Known genes | Mapping data |
|---|---|---|---|---|---|---|
| WI-20996 | stSG41980, T48876 | Hs.19280 | R26389 | 132199 | KIAA0544 protein | R-501O7 |
| SGC33875 | T98917 | 122669 | R-78I14 | |||
| stSG48396 | Hs.98023 | AA854974 | 1394041 | R-459K11 | ||
| SGC34340 | WI-6575, SGC34340 | Hs.78909 | X78992 | ERF-2 protein | R-339H12 | |
| STSG16054 | A009V10 | Hs.17711 | R98822 | 207006 | R-339H12 | |
| WI-14187 | G21943 | Hs.16063 | AA515534 | 925219 | R-339H12 | |
| stSG52431 | Hs.165571 | AI566776 | 2168475 | R-489G24 | ||
| T89476 | sts-T89476 | Hs.16587 | AA934036 | 1551421 | R-489G24 | |
| stSG15818 | R83265 | 194194 | R-489G24 | |||
| WI-8407 | Hs.108441 | Z29481 | 3-Hydroxyanthranilic acid dioxygenase | R-489G24 | ||
| BCD1971 | M79071 | no image clone | R-489G24 | |||
| T71978 | sts-T71978 | Hs.168439 | AA534545 | 925906 | R-489G24 | |
| stSG58568 | Hs.58598 | AI359618 | 2013757 | R-489G24 | ||
| stSG30561 | Hs.58598 | AA169121 | 594556 | 506D15 | ||
| H96893 | stSG21270 | Hs.32241 | AI274775 | 1986682 | R-489K21 | |
| stSG21136 | H58682 | 205857 | R-489K21 | |||
| AF151818 | CGI 60 protein | R-489K21 | ||||
| T99836 | Hs.18176 | T99836 | 123200 | R-489K21 | ||
| WI16988 | A007E35 | Hs.142718 | AA034046 | 429916 | R-1081G2 | |
| stSG63433 | Hs.190354 | AA700586 | 433330 | R-1081G2 | ||
| stSG32054 | stSG1757, SHGC-8019 T17102 | Hs.182490 | M92439 | Leucine-rich protein mRNA | R-1081G2 | |
| Hs.128293 | AI223013 | 1838809 | R-559M23 | |||
| Hs.225721 | AI873444 | 2362159 | Trans-prenyltransferase (TPT) | R-559M23 | ||
| Hs.225721 | AA889371 | 1471263 | R-559M23 | |||
| AA457390 | 838194 | R-559M23 | ||||
| AA828868 | 1374287 | R-559M23 | ||||
| Hs.187945 | AA937699 | 1491139 | R-559M23 | |||
| A004I37/H99661 | stSG51096 | Hs.169652/Hs.5687 | AA164383/AA565932 | PP2C | Protein phosphatase 2C | R-24I5 |
| stSG3387 | A003R48 | R11895 | 25315 | R-24I5 | ||
| stSG52154 | Hs.112916 | AA620873 | 1049335 | R-24I5 | ||
| M95548* | SHGC-9884, stSG4626 | Hs.198294/Hs.154834 | D82326/M95548 | Amino acid transporter, SLC3A1 | R-24I5 | |
| M95548* | SHGC-9884, stSG4626 | Hs.110 | AB007896 | KIAA0436 mRNA | R-24I5 | |
| A009V46 | Hs.174862, Hs.220859 | H95593 | 242930 | R-194L1 | ||
| A010A13 | WI-18144 | Hs.124990 | H58934 | 207758 | R-194L1 | |
| D29089 | D29089 | no image clone | R-194L1 | |||
| stSG8383 | H60063 | 205767 | R-194L1 | |||
| Hs.132799 | AA922097 | 1543611 | R-194L1 | |||
| Hs.129473 | AA994134 | 1628550 | R-194L1 | |||
| Hs.213492 | AI928677 | 2466254 | R-194L1 | |||
| Hs.124990 | H60592 | 207898 | R-194L1 | |||
| W80452 | 415494 | R-194L1 | ||||
| stSG26329 | H57813 | 205424 | R289E6 | |||
| Hs.136519 | AA601487 | 1100969 | R-442O5 | |||
| T87425 | 115418 | R-442O5 | ||||
| WI-3495 | G02557 | Hs.188588 | AA583683 | 1088083 | R-442O5 | |
| AA835723 | 1372934 | R-442O5 | ||||
| H64341 | 210718 | R-442O5 | ||||
| AA838139 | 1385549 | R-442O5 | ||||
| Hs.170428 | AI459058 | 2149952 | R-442O5 | |||
| Hs.170428 | AW206717 | 2722480 | R-442O5 | |||
| Hs.233172 | AW022706 | 2486137 | R-442O5 | |||
| stSG46410 | Hs.97696 | AA399659 | 729207 | R-89K21 | ||
| N24094 | N24095 | 266792 | R-576F1 | |||
| WI-3976 | SHGC-17237 | Hs.246042 | N75945 | 295200 | R-576F1 | |
| stSG49702 | Hs.167640 | H87795 | 220658 | R-436K12 | ||
| WI-18791 | U03911, SHGC-2762, SHGC-10660 | Hs.78934 | HSU03911 | (hMSH2) | Mismatch repair protein (MSH2) mRNA | R-436K12 |
| stSG60189 | Hs.122384 | AI015254 | 1641212 | R-436K12 | ||
| embl-AA007353 | sts-AA007353 | Hs.256042 | AA007353 | 429281 | R-436K12 | |
| SGC34683 | SHGC-34683, stSG28638, stSG9035 | Hs.117085 | AA677756 | 430606 | R-436K12 |
All ESTs and genes that were mapped to the YAC and BAC contigs (Figures 1 and 2) are shown. For clarity, only the BAC ID is shown in the far right column. BAC R-436K12 is not indicated on the BAC contig (Figure 2), but is contiguous with the centromeric end. Only a representative EST or Image clone is indicated, where multiple clones were identified. The asterisk indicates a GeneMap ID, M95548, which identifies two separate genes that share the 3′ UTR (see text). Additionally, there are two GeneMap98 IDs for the same gene (PP2C) that have been consolidated.