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. Author manuscript; available in PMC: 2006 Jan 26.
Published in final edited form as: Mol Cell Proteomics. 2005 May 18;4(8):1061–1071. doi: 10.1074/mcp.M400207-MCP200

Supplemental Table S1.

Peptide sequences obtained by LC-MS/MS

CD147:
Exp. I (7) Exp. II (10)
FFVSSSQGR WLKGGVVLK
GSDQAIITLR FFVSSSQGR
GGVVLKEDALPGQK GSDQAIITLR
SESVPPVTDWAWYK GGVVLKEDALPGQK
KPEDVLDDDDAGSAPLK SESVPPVTDWAWYK
RKPEDVLDDDDAGSSAPLK KPEDVLDDDDAGSAPLK
SELHIENLNMEADPGQYR RKPEDVLDDDDAGSSAPLK
RRKPEDVLDDDDAGSSAPLK
SELHIENLNMEADPGQYR
RKPEDVLDDDDAGSSAPLKSSGQHQNDK
Exp. III (8) Exp. IV (8)
FFVSSSQGR FFVSSSQGR
GSDQAIITLR GSDQAIITLR
GGVVLKEDALPGQK GGVVLKEDALPGQK
SESVPPVTDWAWYK SESVPPVTDWAWYK
KPEDVLDDDDAGSAPLK SSEHINEGETAMLLVCK
RKPEDVLDDDDAGSSAPLK KPEDVLDDDDAGSAPLK
RRKPEDVLDDDDAGSSAPLK RKPEDVLDDDDAGSAPLK
SELHIENLNMEADPGQYR SELHIENLNMEADPGQYR

CD98hc:
Exp. 1 (13) Exp. II (6)
EEGSPLELER EEGSPLELER
VILDLTPNYR ADLLLSTQPGR
EDFDSLLQSAK EDFDSLLQSAK
FTGLSKEELLK LKLEPHEGLLLR
LLTSFLPAQLLR IKVAEDEAEAAAAAK
IKVAEDEAEAAAAAK DDVAQTDLLQIDPNFGSK
GQSEDPGSLLSLFR
GENSWFSTQVDTVATK Exp. III
IGDLQAFQGHGAGNLAGLK GQSEDPGSLLSLFR
DDVAQTDLLQIDPNFGSK
SLLHGDFHAFSAGPGLFSYIR
NQKDDVAQTDLLQIDPNFGSK
NQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAK
Exp. IV (6) Exp. V (23)
VILDLTPNYR GLVLGPIHK
LLTSFLPAQLLR LDYLSSLK
GQSEDPGSLLSLFR GRLDYLSSLK
DDVAQTDLLQIDPNFGSK EEGSPLELER
DLLLTSSYLSDSGSTGEHTK ADLLLSTQPGR
NQKDDVAQTDLLQIDPNFGSK LEPHEGLLLR
WWHTGALYR
VILDLTPNYR
WCSWSLSQAR
VAEDEAEAAAAAK
EDFDSLLQSAK
EVELNELEPEK
LLTSFLPAQLLR
LKLEPHEGLLLR
IKVAEDEAEAAAAAK
GQSEDPGSLLSLFR
GENSWFSTQVDTVATK
IGDLQAFQGHGAGNLAGLK
DDVAQTDLLQIDPNFGSK
DLLLTSSYLSDSGSTGEHTK
ADLLLSTQPGREEGSPLELER
NQKDDVAQTDLLQIDPNFGSK
EVELNELEPEKQPMNAASGAAMSLAGAEK
Exp. VI (14) Exp VII (20)
LDYLSSLK VAGSPGWVR
EEGSPLELER GLVLGPIHK
ADLLLSTQPGR LDYLSSLK
LEPHEGLLLR GRLDYLSSLK
WWHTGALYR EEGSPLELER
VILDLTPNYR ADLLLSTQPGR
EDFDSLLQSAK WWHTGALYR
EVELNELEPEK VILDLTPNYR
LLTSFLPAQLLR EDFDSLLQSAK
LKLEPHEGLLLR LLTSFLPAQLLR
GQSEDPGSLLSLFR LKLEPHEGLLLR
GENSWFSTQVDTVATK IKVAEDEAEAAAAAK
DLLLTSSYLSDSGSTGEHTK GQSEDPGSLLSLFR
ADLLLSTQPGREEGSPLELER GENSWFSTQVDTVATK
IGDLQAFQGHGAGNLAGLK
DDVAQTDLLQIDPNFGSK
DLLLTSSYLSDSGSTGEHTK
SLLHGDFHAFSAGPGLFSYIR
NQKDDVAQTDLLQIDPNFGSK
EVELNELEPEKQPMNAASGAAMSLAGAEK

ASCT2:
Exp. I (5) Exp. II (3)
LGPEGELLIR STEPELIQVK
STEPELIQVK EVLDSFLDLAR
EVLDSFLDLAR SELPLDPLPVPTEEGNPLLK
NIFPSNLVSAAFR
SELPLDPLPVPTEEGNPLLK
Exp IV (4) Exp. V
EVLDSFLDLAR SELPLDPLPVPTEEGNPLLK
NIFPSNLVSAAFR
IVEMEDVGLLFAR Exp. VII
SELPLDPLPVPTEEGNPLLK SELPLDPLPVPTEEGNPLLK

LAT1:
Exp. I (3) Exp. VI (3)
ALAAPAAEEKEEAP SADGSAPAGEGEGVTLQR
SADGSAPAGEGEGVTLQR GDVSNLDPNFSFEGTK
GDVSNLDPNFSFEGTK VQDAAAAKLLALALIILLGFVQIGK
Exp. VII (3)
ALAAPAAEEKEEAP
SADGSAPAGEGEGVTLQR
GDVSNLDPNFSFEGTK

EpCAM:
Exp. I TQNDVDIADVAYYFEK
Exp. V TQNDVDIADVAYYFEK
Exp. VI TQNDVDIADVAYYFEK
Exp. VII TQNDVDIADVAYYFEK

MCT1:
Exp. I Exp.II (3)
DLHDANTDLIGR DLHDANTDLIGR
DLHDANTDLIGRHPK
Exp. III (2) EEETSIDVAGKPNEVTK
DLHDANTDLIGR
EEETSIDVAGKPNEVTK

MCT4:
Exp. I Exp. II (4)
LHKPPADSGVDLR EVEHFLK
NGEVVHTPETSV
Exp. III LHKPPADSGVDLR
LHKPPADSGVDLR AEPEKNGEVVHTPETSV

MCT 8:
Exp. I VHEPEPTPTVETR

CD29:
Exp. II
IGFGSFVEK
LRSGEPQTFTLK
LSENNIQTIFAVTEEFQPVYK

Na/K ATPase, α 1:
Exp. I (2) Exp. II (5)
QGAIVAVTGDGVNDSPALK ADIGVAMGIAGSDVSK
GVGIISEGNETVEDIAAR RAVAGDASESALLK
AVFQANQENLPILK
Exp. IV (2) LNIPVSQVNPR
LNIPVSQVNPR SPDFTNENPLETR
AVFQANQENLPILK
Exp. VI Exp. VII
GVGIISEGNETVEDIAAR GVGIISEGNETVEDIAAR

Na/K ATPase, β3:
Exp. V LFIYNPTTGEFLGR

Glycopr. Trop-2:
Exp. I AAGDVDIGDAAYYFER
Exp. VII AAGDVDIGDAAYYFER

I3 Bp:
Exp. I TVNTFSQSVSSLFGEDNVR

CD71:
Exp. I GFVEPDHYVVVGAQR
Exp. II (2) SSGLPNIPVQTISR
VEYHFLSPYVSPK
Exp. IV (2) VSASPLLYTLIEK
GFVEPDHYVVVGAQR

Sel-1 homolog:
Exp. I (2) Exp. IV (2)
LVANHVASDISLTGGSVVQR LVANHVASDISLTGGSVVQR
VSYALLFGDYLPQNIQAAR VSYALLFGDYLPQNIQAAR

CD166:
Exp. II (4)
ALFLETEQLK
SSNTYTLMDVR
ALFLETEQLKK
SVQYDDVPEYK

CD49e:
Exp. II LLESSLSSSEGEEPVEYK

CD44:
Exp. II SQEMVHLVNK

Leuk. virus recept.1:
Exp. II LSVGDIENKHPVSEVGPATVPLQAVVEER

HLA-I,A-25:
Exp. II APWIEQEGPEYWDR