AIDS	Acquired immunodeficiency syndrome
CL	Cutaneous leishmaniasis
CPRG	Chlorophenol red-β-D-galactopyranoside
HAART	Highly active antiretroviral therapy
HIV	Human immunodeficiency virus
IN	Integrase
MD	Molecular dynamics
MM-GBSA	Molecular Mechanics Generalized Born Surface Area
MOE	Molecular Operating Environment
MTT	3-(4,5-Dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide
NTD	Neglected tropical disease
RMSD	Root-mean-square deviation
RMSF	Root-mean-square fluctuation
RNase H	Ribonuclease H
RoG	Radius of gyration
RT	Reverse transcriptase
SAR	structure–activity relationship
SASA	Solvent-accessible surface area
TSN	Tudor staphylococcal nuclease