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. 2026 May 29;27(2):e00065-26. doi: 10.1128/jmbe.00065-26

TABLE 1.

Timeline of activities in the bacteriophage course

Day Main activities Key procedures Expected outcome
Day 1 Introduction and sample collection Instructions about sample collection and biosafety
Collection of environmental samples
Samples ready for processing
Day 2 Laboratory introduction and sample preparation Biosafety training
Introduction to the equipment
Introduction to bioinformatic analysis (genome assembly, genome assembly, and available tools)
Sample centrifugation and filtration
Preparation of enrichment cultures
Enrichment cultures prepared and incubated (overnight)
Bioinformatic analysis
Day 3 Phage detection (initial screening) Processing enrichment cultures (chloroform treatment)
Preparation of double agar plates
Spotting enrichment cultures
Spotting filtered samples
Plates incubated for phage detection (lysis plaques expected next day)
Bioinformatic analysis
Day 4 Analysis and experimental expansion Detection of lysis zones
Preparation of phage stocks
Preparation of new plates for phage titration and host range assays
New plates incubated (titration and host range results expected next day)
Bioinformatic analysis
Day 5 Final analysis and presentation of the results Phage titration (PFU/mL)
Host range evaluation
Genomics discussion
Group presentations
Interpretation of results and course conclusion