TABLE 3.
Taxonomic distribution of rRNA gene clones obtained by PCR amplification of DNA extracted from mouse chowa using bacterium and fungus-selective primers
| Analysis | Taxon | No. of clones | Nearest relative (accession no.)b | % Identity to nearest relativeb |
|---|---|---|---|---|
| Universal bacterial | Oryza sativa (chloroplast) | 6 | AE017114 | 98-100 |
| Pantoea agglomerans | 1 | AY849936 | 99 | |
| Pantoea sp. | 1 | AF451269 | 99 | |
| Pseudomonas sp. | 1 | AY131221 | 99 | |
| Triticum aestivum (chloroplast) | 3 | AJ239003 | 99-100 | |
| Uncultured bacterium | 1 | AF371481 | 99 | |
| Zea mays (mitochondrion) | 4 | AY506529 | 98-100 | |
| Universal fungal | Cladosporium cladosporioides | 10 | AF548071 | 95-100 |
| Phaeosclera dematioides | 1 | Y11716 | 98 | |
| Setomelanomma holmii | 1 | AY161121 | 99 | |
| Triticum aestivum | 1 | AJ272181 | 99 |
a
Chow fed SPF mice.
b
Determined by BLAST (NCBI) (3).