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. 2002 Aug;184(16):4582–4593. doi: 10.1128/JB.184.16.4582-4593.2002

TABLE 3.

Subsystem characteristics and pathway calculation results for H. pylori indicating the total number of extreme pathways in each subsystema

Subsystem No. of reactions No. of fluxes
No. of metabolites No. of extreme pathways of type:
Total no. of pathways Pathway/flux ratio Total no. of H. influenzaee pathways
Internal External I II III
A 75 97 65 114 36 1 21 58 0.23 65
C 34 55 38 48 50 1 17 68 0.55 83
L 50 62 33 76 11 1 12 24 0.13 36
N 68 105 49 86 51 8 36 95 0.38 764
T 86 129 122 154 102 3 20 125 0.42 210
V 75 80 45 113 16 1 5 22 0.14 21
a

Abbreviations for subsystems: A, amino acid biosynthesis and degradation; C, central or core metabolism; L, lipid and cell envelope biosynthesis; N, nucleotide biosynthesis and degradation; T, transport and energy-redox metabolism, (V) vitamin and cofactor biosynthesis. Pathways are classified according to the scheme presented in reference,63 wherein the primary metabolic pathways of functional significance are those of type I.