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. 2002 Sep;184(17):4846–4856. doi: 10.1128/JB.184.17.4846-4856.2002

TABLE 2.

Linkers and primers used for cycle selection

Method Sequence of linker or primera
HhaI selection
    Linker BamHISpeI
     5′CGGATCCACTCTTGACCTCGACTAGTGCA3′
     3′GCGCCTAGGTGAGAACTGGAGCTGATCACGT5′
(HhaI)
    PCR primer PAS-A 3′TAGGTGAGAACTGGAGCT5′
HpaII selection
    Linker (HpaII) XbaISpeI
     5′CGGATCTAGACTTGACCTCGACTAGTGCA3′
     3′CTAGATCTGAACTGGAGCTGATCACGT5′
    PCR primer PAS-B 3′TAGATCTGAACTGGAGCT5′
a

Boldface letters indicate the identical sequence between the linker and its specific PCR primer. Underlined letters represent target sites for indicated restriction enzymes, and protruding ends of linkers are compatible with DNA fragments generated by restriction enzymes shown in parentheses.