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. 2002 Dec;184(24):6820–6829. doi: 10.1128/JB.184.24.6820-6829.2002

TABLE 1.

Strains, plasmids, and primers used in this worka

Strain, plasmid, or primer Description or sequence Source or reference
Strains
    MC1061 FaraD139 Δ(ara leu)7696 Δ(lacY74) galU galK hsdr hsdM+strA BioRad
    CL100 ΔiscS 17
    CL100(DE3) DE3 lysogen of CL100 17
    CL201 ΔcsdB This work
    CL102 Δcsd ΔcsdB This work
    CL103 ΔthiI This work
    CL250 ΔmnmA b
    CL260 ΔmiaB This work
    PK4331 MG1655 lacZΔ145 ΔiscS::Knr 30
    PK5930 MG1655 lacZΔ145 ΔiscS::Knr ΔcsdA::Cmr c
Plasmids
    pCL010 Wild-type E. coli iscS in pET21c 14
    pCSD Wild-type E. coli csd in pET21c This work
    pCSDB Wild-type E. coli csdB in pET21c This work
    pKO3 For deletion of genes in E. coli 20
Primers
    CSD.N 5′-ATC AAG CCG AGG AGT CAT ATG AAC GTT TTT AAT CCC GCG
    CSD.C 5′-CGA ATT GCG GGT GAA TTC TTA ATC CAC CAA TAA TTC CAG
    CsdB.N 5′-GCT GCC AGG AGG TGC CAT ATG ATT TTT TCC GTC GAC AAA
    CsdB.C 5′-AGC CAT AGT GCC GGA TCC TTA TCC CAG CAA ACG GTG AAT
    CSD.No 5′-AAG GAA AAA AGC GGC CGC TAC ATT TAC CCT GTC TGT CCA TAG TGAT T
    CSD.Ni 5′-CAC GCA ATA ACC TTC ACA CTC CAA ATT TAT AAC CAT GGT ACT CCT CGG CTT G
    CSD.Co 5′-CGC ACG CAT GTC GAC GTC TTA TCC GAC CCG GTT CT
    CSD.Ci 5′-GTT ATA AAT TTG GAG TGT GAA GGT TAT TGC GTG TGA CCG CGC GCT GGA ATT A
    CsdB.No 5′-AAG GAA AAA AGC GGC CGC ACG CAA CTC AAT GGC GAA AAC A
    CsdB.Ni 5′-CAC GCA ATA ACC TTC ACA CTC CAA ATT TAT AAC AAT CAT CTT GCA CCT CCT GGC
    CsdB.Co 5′-CGC ACG CAT GTC GAC CAT TGA CCA TCC GGC AAT GTG A
    CsdB.Ci 5′-GTT ATA AAT TTG GAG TGT GAA GGT TAT TGC GTG CAC CGT TTG CTG GGA TAA CAG
a

For primers, restriction sites are underlined, and the 33-bp gene replacement tag sequence is shown in bold (see text). Primers labeled No, Co, etc., were used to perform in-frame deletion by the method of Link et al. (20).

b

R. Kambampati and C. T. Lauhon, submitted.

c

P. J. Kiley, unpublished data.