Table 2. New LTR HSIs identified.
| Clone |
Accession numbera |
Identity (%)b |
Chromosome |
Subfamilyc |
|
|---|---|---|---|---|---|
| Identified HSIs | Homologs | ||||
| A1h6 | AF493416 | AC091895 | 98 | 5 | II-L4 |
| A3c4 | AF493417 | AL162723 | 97 | X | II-L2 |
| A4a12 | AF493418 | AC015525 | 98 | 3 | II-L4 |
| A4c1 | AF493419 | AC074019 | 99 | 2 | II-T |
| A4d1 | AF493420 | AL359644 | 99 | 9 | II-L4 |
| C2d10 | AF493421 | AC009132 | 97 | 16 | II-L4 |
| C2e8 | AF493422 | AC018539 | 98 | 11 | II-L4 |
| G1d12 | AF493423 | AC019155 | 99 | 7 | II-L4 |
| G1f5 | AF493424 | AC006035 | 99 | 7 | II-L4 |
| G2h11 | AF493425 | AP002513 | 98 | 11 | II-L4 |
| A1c10 | AF493426 | AL596188 | 100 | 6 | II-L4 |
aAccession numbers for the sequences found in the present work and submitted to GenBank are listed in the first column; accession numbers for homologs found in the GenBank database and used for primer design are listed in the second column.
bPercent identity between sequences found in the present work and the corresponding homologs.
cAccording to the classification reported in Lebedev et al. (15).