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. 2006 Feb 3;2(2):e5. doi: 10.1371/journal.pgen.0020005

Figure 9. DNA Sequence Logos of Representative Motifs Putatively Involved in DCC Binding.

Figure 9

Logos (generated using the WebLogo software) represent degenerate motifs based on related pairs of elements from Table S1. The logos were generated by aligning all the words of related elements from specific pairs: (A) pairs 5, 6, 7, 8, 9, and 10; (B) pairs 11, 12, 13, and 14; (C) pairs 17, 18, 19, and 20; (D) 21, 22, and 23; (E) pairs 15 and 16; and (F) pairs 1, 2, and 3. Pairs 4 and 24 were not included. Motifs Ia–Ie all contain GAGA-related sequences. Motifs IIa and IIb as well as IIIa–IIIc are also related to each other.