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Amino acid sequences of V3 peptides
| HIV-1 isolate | Amino acid sequencea |
|---|---|
| CC | TRPNNNTRKSIRI--GPGQTFYATGDIIGDIRQ |
| Du123 | IRPNNNTRKSIRI--GPGQTFYATNDIIGDIRQ |
| Du151 | TRPNNNTRKSIRI--GPGQTFYATDAIIGNIRE |
| Du172 | TRPSNNTRKSVRI--GPGQTFFATGDIIGDIRQ |
| Du179 | TRPGNNTRKSIRI--GPGQAFY-TNHIIGDIRQ |
| Du422 | TRPNNNTRKSVRI--GPGQTFYATGAIIGDIRE |
| MN | NKRKRIHI--GPGRAFYTTKNIIGTI |
| IIIB | NNNTRKSIRIQRGPGRAFVTIGK-IG |
Amino acids that differ from the consensus clade C sequence (CC) are shown in boldface type
