Table 2. Comparing the fact-checking performance of multiple open-source large language models (LLMs) and the proprietary GPT-4o (the baseline used in previous experiments)a.
| Evaluation metricb | GPT-4o (baseline) | Gemma 3 27B | MedGemma 27B | Llama 3 70B | OpenBioLLM 70B | Qwen 3 32B | Qwen 3 Medical 32B |
|---|---|---|---|---|---|---|---|
| TPc | 6 | 6 | 11 | 12 | 7 | 8 | 8 |
| FPd | 3 | 3 | 3 | 2 | 1 | 2 | 3 |
| TNe | 89 | 84 | 84 | 78 | 79 | 83 | 82 |
| FNf | 2 | 7 | 2 | 8 | 14 | 6 | 7 |
| Sensitivity (recall) | 78 | 46 | 83 | 61 | 33 | 56 | 55 |
| Specificity | 96 | 97 | 97 | 97 | 99 | 98 | 96 |
| Precision (PPVg) | 66 | 68 | 79 | 83 | 88 | 80 | 72 |
| F1-score | 71 | 55 | 81 | 70 | 48 | 66 | 63 |
| Accuracy | 95 | 90 | 95 | 90 | 86 | 92 | 90 |
| Balanced accuracy | 87.3 | 71 | 90 | 79 | 66 | 77 | 76 |
| TP improved atoms | 100 | 100 | 91 | 98 | 100 | 82 | 89 |
| FP falsified atoms | 0 | 30 | 44 | 50 | 0 | 0 | 14 |
| Overall answer quality improved | 20 | 20 | 30 | 8 | 4 | 18 | 24 |
| Overall answer quality equal | 14 | 8 | 6 | 4 | 4 | 8 | 22 |
| Overall answer quality worse | 8 | 4 | 6 | 6 | 10 | 16 | 10 |
| Hallucination rate | 1 | 2 | 3 | 6 | 11 | 4 | 2 |
| Hallucination detection | 50 | 71 | 80 | 52 | 50 | 69 | 60 |
| Inaccuracy rate | 3 | 2 | 3 | 5 | 3 | 3 | 4 |
| Inaccuracy detection | 58 | 38 | 90 | 68 | 22 | 21 | 44 |
The focus was on general-purpose vs medical fine-tuned models of different sizes: Gemma 3 27B vs MedGemma 27B; Llama 3 70B vs OpenBioLLM 70B; and Qwen 3 32B vs Qwen 3 Medical 32B.
Numbers represent the percentage values.
TP: true positive.
FP: false positive.
TN: true negative.
FN: false negative.
PPV: positive predictive value.