AB-Bind	Antibody Binding Affinity Database
ABDPO	Antibody Direct Preference Optimization
AbDb	Antibody Database
AbDiffuser	Antibody Diffusion Model
AbLang	Antibody Language Model
ABlooper	Antibody Loop Structure Prediction Model
AbX	Antibody X
AHo	Honegger Antibody Numbering Scheme
AI	Artificial Intelligence
AntiBERTa	Antibody Bidirectional Encoder Representations from Transformers
AntiFold	Antibody Sequence Design Model
AlphaFold	AlphaFold Protein Structure Prediction System
AlphaFold-Multimer	AlphaFold Multimer Structure Prediction System
BCR	B-Cell Receptor
CDR	Complementarity-Determining Region
CDR-H3	Complementarity-Determining Region of the Heavy Chain 3
CoV-AbDab	Coronavirus Antibody Database
DeepAb	Deep Learning-Based Antibody Structure Prediction Model
ESM	Evolutionary Scale Modeling
ESMFold	Evolutionary Scale Modeling Fold
Fc	Fragment Crystallizable
Fv	Fragment Variable
GNN	Graph Neural Network
H1–H3	Heavy-Chain Complementarity-Determining Regions 1–3
HuCAL	Human Combinatorial Antibody Library
IEDB	Immune Epitope Database
Ig	Immunoglobulin
IgFold	Immunoglobulin Fold
IMGT	International ImMunoGeneTics Information System
L1–L3	Light-Chain Complementarity-Determining Regions 1–3
MD	Molecular Dynamics
MHC	Major Histocompatibility Complex
MiXCR	MiXCR Immune Repertoire Analysis Software
MSA	Multiple Sequence Alignment
NGS	Next-Generation Sequencing
NLP	Natural Language Processing
OAS	Observed Antibody Space
PDB	Protein Data Bank
PCR	Polymerase Chain Reaction
PIRD	Pan Immune Repertoire Database
PLM	Protein Language Model
ProtBERT	Protein Bidirectional Encoder Representations from Transformers
ProtGPT2	Protein Generative Pre-trained Transformer 2
RFdiffusion	RoseTTAFold Diffusion Model
RFdiffusion-antibody	RFdiffusion for Antibody Design
RNA	Ribonucleic Acid
Rosetta	Rosetta Macromolecular Modeling Suite
SAbDab	Structural Antibody Database
SARS-CoV-2	Severe Acute Respiratory Syndrome Coronavirus 2
SVM	Support Vector Machine
TCR	T-Cell Receptor
UniParc	Universal Protein Archive
UniRef	UniProt Reference Clusters
V(D)J	Variable, Diversity, and Joining Gene Segments
VH	Variable Heavy Chain
VL	Variable Light Chain
WHO	World Health Organization
ΔΔG	Change in Gibbs Free Energy upon Mutation