TABLE 9.

Summary of quantitative real-time RT-PCR analysis of Incyte RNA samples^a

Regulation	Gene name	RT-PCR fold regulation (RNA batch 2)					Gene array value
							Clontech (RNA batch 1)				Incyte (RNA batch 2)
		I/U	I+T/U+T	U+T/U	I+T/I	I+T/U	I/U	I+T/U+T	U+T/U	I+T/I	I/U	I+T/U+T
Up	Angiopoietin 2	+3.1	−5.0	+3.7	+2.4	+7.5	—	—	—	—	+4.1	−2.7
	CD14	+1.7	+1.2	+1.4	−2.1	−1.2	+4.9	NR	NR	NR	(+1.3)	NR
	Exodus 2	+19	+18.4	−3.8	−3.2	+4.8	(+1.6)	+6.3	−6.9	−4.1	—	—
	IRF7	+2.7	+2.6	+1.4	+1.3	+4.0	+4.2	+3.2	NR	NR	(+1.4)	(+1.6)
	Metallothionine H1	+1.1	+1.2	+1.1	+1.2	+1.2	NR	+7.6	−6.3	NR	—	—
	Myx R1	+17	+80	−2.5	+32	+32	—	—	—	—	+7.7	+26.4
	SISI3	+18	+25	−3.7	−2.0	+9.2	—	—	—	—	+7.4	+2.4
	TGFβ3	+6.7	+3.5	+1.1	−1.8	+3.8	+2.0	NR	NR	NR	+4.5	+2.3
	TIMP1	+9.0	+2.8	+3.2	+3.6	+15.3	+3.2	+3.6	+2.8	NR	—	—
	RDC1	+13.5	+1.9	+10.6	+1.5	+20.5	+4.1	+4.6	NR	NR	+8.5	+2.6
Down	BMP4	−145	−5.0	−345	+2.1	−69	−7.1	NR	−5.6	NR	−4.7	NR
	Connective tissue GF	−33	−2.0	−53	−3.2	−105	NR	NR	+2.7	+3.2	−14.1	−13.4
	Fibronectin	−21.6	−10.6	−10.0	−4.9	−106	—	—	—	—	−12.6	−13.6
	IL-8	−50	−3.9	−35	+5.5	−9.1	+2.1	−4.6	+5.4	NR	NR	NR
	α4-Integrin	−325	−139	−3.4	−1.5	−480	—	—	—	—	−4.8	−4.6
	MMP2	−15.8	−15.2	+1.2	+1.1	−18	NR	NR	NR	+3.2	−5.1	−5.2
	PAI-1	−17.3	−1.6	−4.1	+2.6	−6.6	−3.5	+3.1	−3.3	+3.2	−11.7	−4.5

^aSee Table 8, footnote a, except comparison was of real-time RT-PCR results with gene array values for batch 2 (Incyte) RNA in the absence and presence (+T) of TPA.