| AIF1 | Allograft Inflammatory Factor 1 |
| ALDH | Aldehyde Dehydrogenase |
| AP-1 | Activator Protein 1 |
| CBB | Calvin–Benson–Bassham cycle |
| LPS | Lipopolysaccharide |
| MAPK | Mitogen-Activated Protein Kinase |
| MAMP | Microbe-Associated Molecular Pattern |
| MeDH | Methanol Dehydrogenase |
| MMO | Methane Monooxygenase |
| mTORC1 | Mechanistic Target of Rapamycin Complex 1 |
| NCBI | National Center for Biotechnology Information |
| NF-κB | Nuclear Factor Kappa B |
| PAMP | Pathogen-Associated Molecular Pattern |
| PCR | Polymerase Chain Reaction |
| PGRP | Peptidoglycan Recognition Protein |
| PO | Phenoloxidase |
| proPO | Prophenoloxidase |
| PRR | Pattern-Recognition Receptor |
| RT-PCR | Reverse Transcription Polymerase Chain Reaction |
| RTK | Receptor Tyrosine Kinase |
| SOXB | Sulfur Oxidation Protein/Gene B |
| SRA | Sequence Read Archive |
| SRCR | Scavenger Receptor Cysteine-Rich |
| STAT | Signal Transducer and Activator of Transcription |
| TFEB | Transcription Factor EB |
| TLR | Toll-Like Receptor |
| TLR2 | Toll-Like Receptor 2 |
| TLR13 | Toll-Like Receptor 13 |
| TNF | Tumor Necrosis Factor |
| WGA | Wheat Germ Agglutinin |