| 5-ASA | 5-aminosalicylic acid (5-ASA; mesalazine) |
| 16S rRNA | 16S ribosomal RNA |
| ANOVA | analysis of variance |
| ASV | amplicon sequence variant |
| BSA | bovine serum albumin |
| CMC-Na | carboxymethyl cellulose sodium |
| DAB | 3,3′-diaminobenzidine |
| DAI | disease activity index |
| DAPI | 4′,6-diamidino-2-phenylindole |
| DSS | dextran sulfate sodium |
| ESI | electrospray ionization |
| FDR | false discovery rate |
| FITC | fluorescein isothiocyanate |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase |
| GMHI | gut microbiome health index |
| GSDMD | gasdermin D |
| HMDB | Human Metabolome Database |
| HRP | horseradish peroxidase |
| IBD | inflammatory bowel disease |
| IL-1β | interleukin-1 beta |
| IL-6 | interleukin-6 |
| IL-18 | interleukin-18 |
| KEGG | Kyoto Encyclopedia of Genes and Genomes |
| LDA | linear discriminant analysis |
| LEfSe | linear discriminant analysis effect size |
| MDI | microbial dysbiosis index |
| NEG | negative ionization mode |
| NF-κB | nuclear factor kappa B |
| NIH | National Institutes of Health |
| NLRP3 | NOD-like receptor family pyrin domain containing 3 |
| PCA | principal component analysis |
| PCoA | principal coordinate analysis |
| PERMANOVA | permutational multivariate analysis of variance |
| PLS-DA | partial least squares discriminant analysis |
| POS | positive ionization mode |
| QC | quality control |
| RT-qPCR | reverse transcription quantitative polymerase chain reaction |
| SD | standard deviation |
| TCM | Traditional Chinese Medicine |
| TNF-α | tumor necrosis factor alpha |
| UC | ulcerative colitis |
| UHPLC-MS/MS | ultra-high-performance liquid chromatography–tandem mass spectrometry |
| VIP | variable importance in projection |
| UHPLC | ultra-high-performance liquid chromatography |