| ADR | adverse drug reaction |
| AUC | area under the receiver operating characteristic curve |
| BA | balanced accuracy |
| CNS | central nervous system |
| DDI | drug–drug interaction |
| ECG | electrocardiogram |
| FAERS | FDA Adverse Event Reporting System |
| FDA | U.S. Food and Drug Administration |
| FN | false negative |
| FP | false positive |
| N | Number of drug pairs belonging to the class in the dataset |
| MNA | multilevel neighborhoods of atoms |
| Pa | probability “to be active” |
| Pi | probability “to be inactive” |
| PASS | Prediction of Activity Spectra for Substances |
| PoSMNA | Pairs of Substances Multilevel Neighborhoods of Atoms |
| QTc | corrected QT interval |
| ROC | receiver operating characteristic |
| SAR | structure–activity relationship |
| Sen. | sensitivity |
| Spec. | specificity |
| TN | true negative |
| TP | true positive |