Table II.
Probe sets up-regulated with time in GA-treated rice half-grains
Induction is the ratio of expression at 8 h relative to 0 h. Similar proteins are identified by accession numbers and a brief description.
| Probe Set | Induction at 8 h in Time Course | Induction at 8 h in d1 Experiment | Accession Nos. | Description |
|---|---|---|---|---|
| Hydrolases | ||||
| OS000411_i_at | 30.4 | 6.5 | gi|113766|sp|P17654| | AMY1_ORYSA α-amylase 1 |
| OS000626_s_at | 10.72 | 23.6 | gi|113680|sp|P27937| | AM3B_ORYSA α-amylase isozyme 3B |
| OS022194_at | 9.96 | 20.95 | gi|113683|sp|P27934| | AM3E_ORYSA α-amylase isozyme 3E |
| OS000501_at | 7.59 | 22.01 | gi|113683|sp|P27934| | AM3E_ORYSA α-amylase isozyme 3E |
| OS023228_at | 9.69 | 11.59 | P14768 | XYNA_PSEFL endo-1,4-β-xylanase A |
| OS000920_s_at | 5.22 | 3.69 | P15737 | E13B_HORVU glucan endo-1,3-β-glucosidase GII |
| OS006213_at | 2.6 | 5.03 | gi|7262670|gb|AAF43928.1|AC012188_5| | Contains similarity to acid phosphatase and contains a sterol desaturase domain (Arabidopsis) |
| OS000590_f_at | 4.57 | 2.27 | Q06015 | CHI3_ARAHY endochitinase 3 |
| Proteolysis | ||||
| OS017015_s_at | 2.88 | 2.66 | gi|7671402|emb|CAB89316.1| | Carboxypeptidase (Arabidopsis) |
| OS020092.1_at | 2.1 | 3.32 | gi|3859606|gb|AAC72872.1| | Contains similarity to Cys proteases (Arabidopsis) |
| OS009235.1_at | 2.93 | 2.34 | P37891 | CBP3_ORYSA Ser carboxypeptidase III |
| OS012349_at | 2.21 | 2.36 | gi|3859607|gb|AAC72873.1| | Contains similarity to Cys proteases (Arabidopsis) |
| OS000667.1_at | 2.44 | 2.08 | gi|7635921|emb|CAB88392.1| | Bowman-Birk trypsin inhibitor (rice) |
| Lipid mobilization | ||||
| OS008739.1_at | 4.76 | 12.81 | gi|4587543|gb|AAD25774.1|AC006577_10| | Lipase/acylhydrolase with GDSL-motif family (Arabidopsis) |
| OS001843_f_at | 3.19 | 2.34 | P10974 | NLTB_RICCO nonspecific lipid-transfer protein B |
| OS012669.1_at | 2.68 | 2.46 | gi|3044212|gb|AAC13497.1| | Acyl-CoA oxidase (Arabidopsis) |
| Membrane transport | ||||
| OS006069.1_at | 2.43 | 5.75 | gi|7262678|gb|AAF43936.1|AC012188_13| | Contains similarity to UDP-galactose transporter (Arabidopsis) |
| OS005993.1_at | 3.85 | 3.09 | gi|5091611|gb|AAD39600.1|AC007858_14 gb|U43629| | Integral membrane protein from Beta vulgaris and member of the sugar transporter family (rice) |
| OS019839_s_at | 2.96 | 3.76 | gi|4249409|gb|AAD13706.1| | Sugar transporter (Arabidopsis) |
| Signaling | ||||
| OS015683_at | 5.66 | 3.2 | gi|4938494|emb|CAB43852.1| | CBL protein (Arabidopsis) |
| OS009519_at | 4.45 | 3.5 | gi|1277092|gb|AAB03774.1| | n-Acetyltransferase hookless1 |
| OS015049_i_at | 4.28 | 2.13 | gi|3309086|gb|AAC26010.1| | CBL protein 3 (Arabidopsis) |
| Other | ||||
| OS013253_at | 2.4 | 7.69 | gi|4584534|emb|CAB40764.1| | Cytochrome P450-like protein (Arabidopsis) |
| OS015512.1_at | 2.73 | 2.92 | gi|6863054|dbj|BAA90487.1| | Heat shock protein 90 (rice) |
| OS000907_s_at | 2.44 | 3.1 | gi|585960|sp|P38389| | S61B_ARATH protein transport protein sec61 β-subunit |
| OS011960.1_s_at | 3.06 | 2.41 | gi|2052381|gb|AAC49696.1| | Calreticulin |
| OS024781_at | 9.56 | 11.63 | gi|4972056|emb|CAB43924.1| | Putative protein (Arabidopsis) |
| OS006047_i_at | 9.02 | 6.91 | gi|3297809|emb|CAA19867.1| | Putative protein (Arabidopsis) |
| OS003244.1_s_at | 3.54 | 6.67 | gi|7378611|emb|CAB83287.1| | Putative protein (Arabidopsis) |
| OS_ORF013995_at | 3.98 | 4.11 | Open reading frame | |
| OS019454_f_at | 4.88 | 2.06 | F21B7.3 (Arabidopsis) | |
| OS010175.1_at | 2.32 | 3.85 | gi|7269851|emb|CAB79710.1| | Putative protein (Arabidopsis) |
| OS001396_at | 3.27 | 2.75 | gi|5123547|emb|CAB45313.1| | Putative protein (Arabidopsis) |
| OS_ORF015460_at | 2.37 | 3.4 | Open reading frame | |
| OS006045.1_at | 2.11 | 3.27 | gi|7485404|pir‖T02648| | Hypothetical protein F12C20.9 (Arabidopsis) |
| OS009650_at | 2.22 | 2.77 | F17L21.8 (Arabidopsis) | |
| OS001908_i_at | 2.01 | 2.65 | gi|7430871|pir‖T00843| | Basic blue protein (Arabidopsis) |