TABLE 2.
Protein | Classa | Dimerizationb with:
|
DNA bindingc with:
|
|||||||
---|---|---|---|---|---|---|---|---|---|---|
v-Reld | c-Rel | NF-κB1 | NF-κB2 | RelA | v-Reld | c-Rel | NF-κB1 | NF-κB2 | ||
v-Rel | ++++ | ++++ | ++++ | ++++ | ++++ | +++ | +++ | ++++ | ++++ | |
M1 | I | +++ | ++++ | +++ | ++++ | − | +/− | ++ | +++ | +++ |
M2 | II | − | + | +++ | ++++ | + | − | + | ++ | + |
M3 | III | + | − | ++++ | ++++ | − | − | − | ++ | + |
M4 | IV | − | − | + | ++ | + | − | − | + | + |
M5 | IV | − | − | ++++ | ++++ | + | − | − | + | + |
M6 | V | − | − | +++ | ++++ | − | − | − | ++ | + |
M7 | V | − | − | +++ | ++++ | − | − | − | +++ | +++ |
M8 | V | − | − | ++ | ++++ | − | − | − | + | + |
M9 | V | − | − | ++++ | + | − | − | − | +++ | +++ |
Each dimerization mutant was assigned to a particular class based on the inability to interact with specific Rel/NF-κB family members.
Quantitative liquid β-galactosidase assays were performed to evaluate the formation of homodimers (23.2 ± 1.2) and heterodimers with c-Rel (23.6 ± 1.3), NF-κB1 (135.3 ± 5.1), NF-κB2 (60.7 ± 13.8), and RelA (61.4 ± 1.3). Dimerization: ++++, >75%; +++, 50 to 75%; ++, 25 to 50%; +, <25%; −, none detected. These values represent the β-galactosidase activity relative to that observed for v-Rel.
Qualitative assessment of DNA-binding activity relative to v-Rel.
Assayed for homodimer formation.