Table 2.
Calculated absorbance ratios of M.RsrI, DNA and complex
ɛ260, mM−1 cm−1 | ɛ280, mM−1 cm−1 | A260/A280 | |
---|---|---|---|
M.RsrI | 22.7 | 48.7 | 0.47 |
DNA | 336 | 177 | 1.90 |
AdoHcy | 15.1 | 2.11 | 7.00 |
1:1::Protein: DNA complex | 374 | 228 | 1.64 |
2:1::Protein: DNA complex | 412 | 279 | 1.48 |
Observed complex | 1.5 |
Complexes are theoretical 1:1 or 2:1::protein:DNA complexes with 1 bound AdoHcy/protein monomer. A260/A280 is calculated as the ratio of the molar absorptivities. The molar absorptivities of M.RsrI was calculated according to the method of Gill and von Hippel (18). The molar absorptivities of the oligodeoxyribonucleotide used were calculated from the molecular weight of the DNA, an absorbance of 20 OD/(mg/ml) at 260 nm for double-strand DNA (35), and the observed A260/A280 ratio. The molar absorptivities of AdoHcy were taken to be equal to that of adenosine (36). The molar absorptivities of complexes were calculated as the sum of the component parts.