Table 2.
Gene 1 | Chr | Start | End | Description | Gene 2 | Chr | Start | End | Description | dN | dS | dN/dS | P(1.0) | P(0.5) |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ENSG00000186301 | 1 | 16,353,203 | 16,360,133 | Similar to macrophage stimulating 1 (hepatocyte growth factor-like) | ENSG00000186715 | 1 | 16,462,486 | 16,468,660 | No description | 0.233 | 0.843 | 0.276 | 0.000 | 0.000 |
ENSG00000051415 | 1 | 103,423,056 | 103,655,958 | α-Amylase, salivary precursor | ENSG00000174876 | 1 | 103,584,694 | 103,592,978 | α-Amylase salivary precursor | 0.015 | 0.061 | 0.245 | 0.000 | 0.044 |
ENSG00000132043 | 1 | 146,102,223 | 146,214,718 | No description | ENSG00000168614 | 1 | 145,923,370 | 145,958,684 | No description | 0.268 | 0.260 | 1.032 | 0.694 | 0.000 |
ENSG00000182639 | 1 | 147,000,080 | 147,000,460 | Histone H2B.J | ENSG00000184678 | 1 | 147,074,392 | 147,074,772 | Histone H2B.Q | 0.004 | 0.188 | 0.021 | 0.001 | 0.004 |
ENSG00000183598 | 1 | 147,001,408 | 147,001,818 | H3 histone family 2; H3 histone family, member M | ENSG00000183702 | 1 | 147,040,763 | 147,042,418 | H3 histone, family 2; H3 histone family, member M | 0.000 | 0.418 | 0.001 | 0.000 | 0.000 |
ENSG00000183558 | 1 | 147,030,455 | 147,030,847 | Histone H2A.O | ENSG00000183717 | 1 | 147,039,210 | 147,039,773 | Histone H2A.O | 0.000 | 0.001 | 0.387 | 0.758 | 0.811 |
ENSG00000182217 | 1 | 147,047,334 | 147,049,286 | Histone H4 | ENSG00000183941 | 1 | 147,020,824 | 147,022,776 | Histone H4 | 0.001 | 0.000 | 0.797 | 0.743 | |
ENSG00000169769 | 2 | 89,344,195 | 89,344,735 | IG κ chain V-III region NG9 precursor | ENSG00000184817 | 2 | 87,540,174 | 87,540,735 | No description | 0.051 | 0.061 | 0.839 | 0.749 | 0.324 |
ENSG00000173756 | 2 | 89,423,308 | 89,423,634 | IG κ chain V-II region GM607 precursor | ENSG00000182563 | 2 | 89,330,327 | 89,330,632 | No description | 0.092 | 0.237 | 0.388 | 0.014 | 0.500 |
ENSG00000131426 | 2 | 89,897,439 | 89,897,914 | IG κ chain V-I region HK 101 precursor | ENSG00000163245 | 2 | 89,301,505 | 89,301,971 | IG κ chain V-I region | 0.027 | 0.029 | 0.903 | 0.888 | 0.403 |
ENSG00000172038 | 2 | 89,912,079 | 89,912,595 | IG κ chain V-III region CLL precursor (rheumatoid factor) | ENSG00000186192 | 2 | 89,058,824 | 89,248,127 | IG κ chain C region | 0.045 | 0.098 | 0.459 | 0.116 | 0.858 |
ENSG00000163184 | 2 | 89,957,240 | 89,957,539 | IG κ chain V-I region | ENSG00000186856 | 2 | 89,062,541 | 89,242,332 | No description | 0.000 | 0.021 | 0.001 | 0.040 | 0.105 |
ENSG00000169606 | 2 | 132,594,457 | 132,595,857 | No description | ENSG00000172981 | 22 | 14,635,352 | 14,636,482 | No description | 0.031 | 0.165 | 0.191 | 0.000 | 0.001 |
ENSG00000154927 | 2 | 132,690,833 | 132,735,739 | No description | ENSG00000186825 | 2 | 132,763,505 | 132,764,092 | No description | 0.000 | 0.006 | 0.001 | 0.118 | 0.210 |
ENSG00000177631 | 4 | 49,320 | 78,099 | No description | ENSG00000182141 | 22 | 15,009,448 | 15,026,562 | No description | 0.327 | 0.582 | 0.562 | 0.000 | 0.003 |
ENSG00000184671 | 5 | 69,006,181 | 69,062,049 | Baculoviral IAP repeat-containing protein 1 (neuronal apoptosis inhibitory protein) | ENSG00000185284 | 5 | 69,659,709 | 69,678,715 | No description | 0.036 | 0.113 | 0.318 | 0.000 | 0.051 |
ENSG00000182078 | 5 | 69,234,613 | 69,234,750 | No description | ENSG00000186932 | 5 | 70,293,834 | 70,293,971 | No description | 0.000 | 0.001 | 0.001 | 0.766 | 0.874 |
ENSG00000183666 | 5 | 69,498,165 | 69,537,080 | No description | ENSG00000183761 | 5 | 69,239,339 | 69,301,070 | No description | 0.000 | 0.001 | 0.000 | 0.682 | 0.832 |
ENSG00000180027 | 5 | 70,249,240 | 70,289,288 | SMA3 protein | ENSG00000185759 | 5 | 69,997,497 | 70,038,832 | SMA3 protein | 0.000 | 0.001 | 0.410 | 0.730 | 0.813 |
ENSG00000174133 | 5 | 70,271,857 | 70,276,207 | No description | ENSG00000186361 | 5 | 70,010,592 | 70,014,942 | No description | 0.039 | 0.026 | 1.514 | 0.001 | 0.000 |
ENSG00000170135 | 7 | 73,622,573 | 73,679,914 | Transcription factor GTF2IRD2 | ENSG00000174428 | 7 | 73,962,893 | 73,977,192 | Transcription factor GTF2IRD2 | 0.052 | 0.099 | 0.524 | 0.002 | 0.820 |
ENSG00000123965 | 7 | 73,718,985 | 73,733,868 | Postmeiotic segregation increased 2-like 5 | ENSG00000135165 | 7 | 71,762,053 | 75,683,468 | Zona pellucida sperm-binding protein 3 precursor | 0.007 | 0.009 | 0.793 | 0.802 | 0.611 |
ENSG00000165178 | 7 | 73,984,535 | 73,999,836 | No description | ENSG00000182487 | 7 | 72,046,778 | 72,062,076 | No description | 0.003 | 0.023 | 0.137 | 0.007 | 0.072 |
ENSG00000181881 | 7 | 143,339,071 | 143,443,973 | No description | ENSG00000181926 | 7 | 143,383,314 | 143,389,573 | No description | 0.000 | 0.000 | 0.858 | 0.991 | 0.832 |
ENSG00000170341 | 7 | 143,406,977 | 143,407,891 | Seven transmembrane helix receptor | ENSG00000170356 | 7 | 143,320,745 | 143,321,671 | Seven transmembrane helix receptor | 0.000 | 0.004 | 0.001 | 0.104 | 0.189 |
ENSG00000106714 | 9 | 39,063,817 | 39,278,466 | Contactin associated protein-like 3 precursor (cell recognition molecule CASPR3) | ENSG00000154529 | 9 | 39,704,516 | 39,839,734 | No description | 0.009 | 0.020 | 0.422 | 0.229 | 0.809 |
ENSG00000147926 | 9 | 39,908,370 | 39,912,422 | No description | ENSG00000182355 | 9 | 39,345,699 | 39,351,955 | No description | 0.009 | 0.006 | 1.560 | 0.295 | 0.005 |
ENSG00000179828 | 9 | 40,483,601 | 40,501,134 | No description | ENSG00000182153 | 9 | 41,776,397 | 41,793,931 | No description | 0.000 | 0.003 | 0.001 | 0.154 | 0.261 |
ENSG00000170165 | 9 | 43,977,955 | 43,988,544 | No description | ENSG00000176057 | 9 | 43,907,570 | 43,918,159 | No description | 0.000 | 0.003 | 0.001 | 0.147 | 0.251 |
ENSG00000170161 | 9 | 63,660,398 | 63,661,000 | No description | ENSG00000186383 | 9 | 41,506,025 | 41,506,582 | No description | 0.015 | 0.055 | 0.269 | 0.091 | 0.420 |
ENSG00000176299 | 14 | 18,238,610 | 18,239,551 | Seven transmembrane helix receptor | ENSG00000182974 | 15 | 19,866,208 | 19,867,149 | Seven transmembrane helix receptor | 0.029 | 0.028 | 1.034 | 0.942 | 0.097 |
ENSG00000176294 | 14 | 18,285,736 | 18,286,659 | Seven transmembrane helix receptor | ENSG00000183706 | 15 | 19,880,105 | 19,881,055 | Seven transmembrane helix receptor | 0.077 | 0.191 | 0.402 | 0.000 | 0.356 |
ENSG00000175733 | 15 | 21,016,715 | 21,019,583 | No description | ENSG00000184095 | 15 | 19,057,902 | 19,060,769 | No description | 0.083 | 0.091 | 0.913 | 0.756 | 0.025 |
ENSG00000128731 | 15 | 25,958,549 | 26,169,609 | HECT domain and RLD 2 | ENSG00000140181 | 15 | 20,829,990 | 20,883,368 | No description | 0.020 | 0.034 | 0.599 | 0.017 | 0.391 |
ENSG00000153684 | 15 | 26,233,151 | 26,236,568 | No description | ENSG00000183629 | 15 | 26,495,524 | 26,498,941 | No description | 0.000 | 0.001 | 0.001 | 0.590 | 0.671 |
ENSG00000169861 | 16 | 32,106,704 | 32,113,996 | No description | ENSG00000182414 | 16 | 32,009,310 | 32,099,878 | IG heavy chain V-III region | 0.305 | 0.533 | 0.572 | 0.036 | 0.611 |
ENSG00000183677 | 18 | 42,811,361 | 42,813,622 | RNA polymerase II transcription factor SIII subunit A2 (elongin A2) | ENSG00000183791 | 18 | 42,806,560 | 42,808,200 | RNA polymerase II transcription factor SIII subunit A3 (elongin A3) | 0.070 | 0.085 | 0.825 | 0.381 | 0.018 |
ENSG00000130538 | 22 | 14,823,378 | 14,824,325 | No description | ENSG00000186445 | 14 | 18,171,223 | 18,172,203 | Seven transmembrane helix receptor | 0.008 | 0.000 | 0.066 | 0.016 | |
ENSG00000185912 | Y | 8,898,452 | 8,960,986 | Testis-specific Y-encoded protein | ENSG00000187194 | Y | 9,000,204 | 9,001,613 | No description | 0.052 | 0.126 | 0.412 | 0.089 | 0.699 |
ENSG00000131007 | Y | 19,638,276 | 19,645,782 | Transcript Y 9 protein | ENSG00000131009 | Y | 19,788,761 | 19,796,267 | Transcript Y 9 protein | 0.000 | 0.002 | 0.001 | 0.821 | 0.941 |
ENSG00000169953 | Y | 19,788,522 | 19,830,805 | Heat shock transcription factor, Y-linked | ENSG00000172468 | Y | 19,603,741 | 19,646,021 | Heat shock transcription factor, Y-linked | 0.000 | 0.002 | 0.001 | 0.601 | 0.633 |
Gene identifiers, coordinates, and descriptions are from the Ensembl database (v. 27.35a) and are based on the NCBI_34 genome build. P-values for likelihood ratios are given for observed dN/dS compared to a null dN/dS of 1.0 or 0.5, respectively.