TABLE 3.
Superposition of individual glycosylation sites from Aura virus around threefold (i3) and quasi-threefold (q3) axes
| Site | RMS deviation (Å) from T = 4 quasi-symmetrya
|
||
|---|---|---|---|
| i3 on i3 RMS | q3 on q3 RMS | i3 on q3 RMS | |
| E1-139b | 0.6 | 5.4 | 3.1 |
| E1-245 | 1.5 | 1.3 | 3.1 |
| E2-197 | 0.5 | 1.3 | 1.5 |
| E2-319 | 0.3 | 1.5 | 1.2 |
a
The i3 rotation axis passes through the particle center. Rotation about the spike symmetry axes (Kappa) was 120.0° for i3 on i3 and q3 on q3 for Aura sites. RMS, root mean square.
b
Corresponds to the B fit, as reported in reference 17.