TABLE 3.
Comparative sequence analysis of horse (strains V and He/80) and sheep BDV isolates with reference to BDV S-589a
| Isolate and/or host | No. of substitionsb for:
|
|||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| p40
|
p10
|
p24
|
p16
|
p56
|
||||||
| nt | aa | nt | aa | nt | aa | nt | aa | nt | aa | |
| Strain V | 18 (1.6) | 1 (0.3) | 6 (2.3) | 2 (2.3) | 9 (1.5) | 4 (2) | 12 (2.9) | 1 (0.7) | 35 (2.3) | 7 (1.4) |
| He/80 | 56 (5.4) | 3 (0.8) | 5 (1.9) | 2 (2.3) | 12 (2) | 2 (1) | 14 (3.3) | 0 | 54 (3.6) | 8 (1.6) |
| Sheepc (S1) | NAh | NA | NA | NA | 14 (2.3) | 2 (1) | NA | NA | NA | NA |
| Sheepd (S2) | NA | NA | NA | NA | 4 (0.6) | 3 (1.5) | NA | NA | NA | NA |
| Sheepe (S6) | NA | NA | NA | NA | 5 (0.8) | 4 (2) | NA | NA | NA | NA |
| Sheep 1f | NA | NA | NA | NA | 16 (2.6) | 1 (0.5) | NA | NA | NA | NA |
| Sheepg | 42 (3.8) | 3 (0.8) | NA | NA | 17 (2.8) | 1 (0.5) | 13 (2.9) | 0 | 60 (3.9) | 4 (0.8) |
a
GenBank accession number AY066023; from sheep no. 9.
b
Numbers in parentheses indicate divergence as a percentage of the total sequence. nt, nucleotides; aa, amino acids.
c
Accession no. U94883.
d
Accession no. U94884.
e
Accession no. U94885.
f
Sequence derived from the work of Binz et al. (5).
h
NA, not available.