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. 2002 Oct;76(20):10383–10392. doi: 10.1128/JVI.76.20.10383-10392.2002

TABLE 1.

Trypsin digestion

Peptide Retention time (min) Sequencea Measured mass (Da) Theoretical mass (Da) Measured reduced mass
T1 62.91 ENITQWNLSDNGTNGIQHAMYLR 2,820.3 2,674.3 b
T2 43.31 SLBGIWPGK 994.0 993.55
T4 43.31 GVPTHLWTDVELK 1,378.5 1,378.75
T5b/T6 32.80 SEGTNYTCCKLQR 1,500.5f 1,499.67 1,502.5
T5/T6 48.85 EIQGMMDASEGTNYTCCKLQR 2,375.8f 2,375.02 2,377.8d
T7 17.95 HEWNK 712.5 712.34
T8 + T3 72.61 HGWCNWHNIDPWIQLMNRTCK 2,680.4f 2,679.27 2,320.2e
ICK
T9 29 TQADLAEGPPVK 1,224.5 1,224.64 NTc
T11/T12 33.55 YDKDADINVVTQAR 1,606.6 1,606.8 NT
a

Several peptides were subjected to MS-MS. The elucidated sequence is underlined and bold.

b

—, no difference between oxidized and reduced fragments.

c

NT, not tested.

d

Theoretical mass of reduced T5/T6, 2,377.0 Da.

e

Theoretical mass of T8, 2,319.1 Da.

f

Fragment is approximately 1 Da larger due to Asn to Asp modification during N deglycosylation.