TABLE 3.
Analysis of 3-series variants by RNase protection assay and Northern blottinga
| RNase protection assay
|
Northern blotting
|
|||
|---|---|---|---|---|
| pgb | Splicedc | pgb | sgd | |
| WT | 1.00 | 0.36 ± 0.04 | 1.00 | 0.69 ± 0.07 |
| B3 | 0.16 ± 0.05 | 0.82 ± 0.28 | 0.14 ± 0.02 | 1.07 ± 0.24 |
| A3 | 0.14 ± 0.08 | 0.26 ± 0.15 | 0.09 ± 0.04 | 0.55 ± 0.22 |
| A3/B3 | 0.36 ± 0.10 | 0.16 ± 0.07 | 0.25 ± 0.04 | 0.37 ± 0.07 |
Values are based on measurements made on poly(A)+ RNA isolated from independent transfections, with five for wild type (WT), four for A3/B3, and three for B3 and A3. First, all DHBV RNA levels were normalized to the level of GFP mRNA. Then, the value of WT pgRNA was set to 1.00 and all other RNA levels were accordingly adjusted, and then the mean and standard deviation were calculated.
Pregenomic class of RNAs.
Spliced RNA.
Subgenomic class of RNAs.