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. 2005 May 13;89(2):768–781. doi: 10.1529/biophysj.105.058917

TABLE 9.

The contributions for the free energies of detainment (see Eq. 5)

PB calculation*
ɛ = 4 ɛ = 10 ɛ = 20 ɛ = 40 DDSF TΔSt, ion ΔGb
Na+ −10.0 −3.6 −1.7 −1.1 −7.2 2.5 −0.55
Cl −18.9 −7.2 −3.5 −2.2 −8.3 2.1 −1.26
*

Calculated by Eq. 1.

Calculated by Eq. 2.

Reference energy, calculated throughout the 10-ns simulation using Eq. 5.

The energies are presented in kcal mol−1; ɛ is the dielectric constant as used for the calculation of ΔGel (see Methods).