TABLE 2.
Oligonucleotide primers for amplification of the atp6 and tctp genes from P. chabaudi chabaudi
| Gene | Sense | Name | Sequence (5′-3′) | Nucleotides covered |
|---|---|---|---|---|
| atp6 | Sense | 5′UTR 1F | GAA ATA TTC ACA ACT CGT TTG GTC | −4064 to ATG |
| Antisense | 5′UTR 2R | GAA ACT TCG ATC TAC AAA TTG G | ||
| Sense | 5′UTR 3F | CTA CAA GAG TTT AAA TCG GAT TC | ||
| Antisense | 5′UTR 4R | CTT GTA GAT GAC AAA TGC AGG | ||
| Sense | 5′UTR 5F | CGG AGC ACT GTC CTA TAT C | ||
| Antisense | 5′UTR 6R | CGT AGA AAA TGA TAG CAC GG | ||
| Sense | 5′UTR 7F | GAC GTT TGC CAT TCT CGT G | ||
| Antisense | 5′UTR 8R | CCC TTT TCT CAC ACA CAT AAA G | ||
| Sense | 5′UTR 9F | ATT TAG CTT ATC CAA TTT CTT TAC | ||
| Antisense | 5′UTR 10R | GTG TCA GTT TTC TAC AAT GC | ||
| Sense | 5′UTR 11F | AAA CAC TAT ATG GTA TTT ACG C | ||
| Antisense | 5′UTR 12R | CTG TGG ATT TAC AAA ATA ATT GAT C | ||
| Sense | 5′UTR 13F | CAT AAT GCC AAA AAA TGC GTA G | ||
| Antisense | 5′UTR 14R | GAG TAG GTT AGC CCT TTG AT | ||
| Sense | 5′UTR 15F | GCT TTT CGT CGC AGC ATA TG | ||
| Antisense | 5′UTR 16R | GTA AAA GTA GAT GAA AAT CGG | ||
| Sense | 1F | GTA GAA GAT GTT TTG AGA GCA G | ATG to TAA | |
| Antisense | 2R | CTG CAT ATT TAT CAA CAG AGC | ||
| Sense | 3F | AAA GCA GAA CAA AGT ATG TTA AC | ||
| Antisense | 4R | CTC CTC TTT GAC ATA GTT GAT ATT C | ||
| Sense | 5F | ATC AAA TGA CAG CTA CTG TTT TTC | ||
| Antisense | 6R | GAA TCA GTT AAT GAC CGT ACA TC | ||
| Sense | 7F | ATT GTA AAG GTG CAC CAG AA | ||
| Antisense | 8R | GCA ACT TCT CCA ATA TTA CTA C | ||
| Sense | 9F | GAA GCT ATT AAA GAA GGA CGA TG | ||
| Antisense | 10R | CAT TAA GCG CAT TGA ACA TTT CG | ||
| Sense | 11F | AGG CAA GTA CCT TAT CAT TAT CC | ||
| Antisense | 12R | GCG TCT TCA ATT TTT GAC CAT AC | ||
| Sense | 13F | GCT AGA ATA TTT GGG GTT G | ||
| Antisense | 14R | CCC CCA AAT TAT GAA TAT GC | ||
| Sense | 3′UTR 1F | CAA AGA ACT CGG GTA TGG TC | TAA to 1114 | |
| Antisense | 5′UTR 2R | CAT CCC TAT GCA AAT GGC C | ||
| Sense | 3′UTR 3F | AAG GTG TGC GTA AAA TGA GG | ||
| Antisense | 3′UTR 4R | GAC ATA GGA AAG ACT GGT GAG | ||
| tctp | Sense | AAT GAT GAA GTA TGC TCT GAC TCA | ATG to TAA | |
| Antisense | TGA TAT GTA AAC AAA TCT AGG AG |