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. 2005 Sep 8;89(6):3701–3713. doi: 10.1529/biophysj.104.055590

FIGURE 3.

FIGURE 3

Initial configuration of the peptides in trajectories aB1–aB3 (a). Configurations at 10 ns obtained from trajectories aB2 (b) and aB3 (c). The initial configuration of the peptides in trajectories pB1-pB3 (d). Configurations at 10 ns obtained from trajectories pB1 (e) and pB2 (f). In a and d, the side chains of the leucine residues are highlighted in red. In b, c, e, and f, the leucines at positions a, d, a′, and d′ are highlighted in green, yellow, orange, and red, respectively, to show the packing of the leucines in different antiparallel and parallel coiled coils. Figures generated using VMD.