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. 2002 Dec;76(24):12735–12746. doi: 10.1128/JVI.76.24.12735-12746.2002

TABLE 1.

Capacity of HCV-specific HLA-A2.1-restricted peptide epitope to bind to purified recombinant HLA-A2.1 molecules and to induce specific CTL or IFN-γ-producing T cells after direct injection

Gene Residue (aa) Epitope
Binding (% inhibition)a ELISPOT (no. of specific spots/106 cells)b
Specific lysis (%) (E/T = 33)c
Sequence Name Mc M1 M2 M3 Mc M1 M2 M3
C 35-44 YLLPRRGPRL C35-44 58 12 73 160 73 2 5 23 2
132-140 DLMGYIPLV C132-140 71 0 211 206 284 4 44 19 26
E1 220-227 IMHTPGCV E1 220-227 55 0 0 55 0 1 2 0 14
257-266 TIRRHVDLLV E1 257-266 0 ND ND ND ND ND ND ND ND
363-372 SMVGNWAKV E1 363-372 16 0 172 160 328 0 47 3 66
E2 401-411 SLVSWLSQGPS E2 401-411 30 0 0 0 0 0 0
614-622 RLWHYPCTI E2 614-622 92 0 82 47 200 10 34 26 22
686-694 ALSTGLIHL E2 686-694 100 0 403 260 112 2 65 10 79
725-734 FLLLADARV E2 725-734 66 0 333 215 622 0 83 34 36
NS3 1073-1081 CVNGVCWTV NS3 1073-1081 18 0 5 47 13 2 27 88 0
1169-1177 LLCPSGHVV NS3 1169-1177 77 2 137 322 160 9 45 7 53
1406-1415 KLTGLGLNAV NS3 1406-1415 71 0 188 458 230 18 33 15 40
1585-1593 YLVAYQATV NS3 1585-1593 76 0 0 173 190 11 7 19 16
NS4B 1769-1777 HMWNFITGI NS4B 1769-1777 30 0 162 93 30 0 13 35 0
1789-1797 SLMAFTASI NS4B 1789-1797 63 71 61 157 177 20 31 15 38
1807-1816 LLFNILGGWV NS4B 1807-1816 94 0 605 22 658 0 19 12 0
1851-1859 ILAGYGAGV NS4B 1851-1859 32 0 5 2 0 6 0 0 0
NS5A 2221-2231 SPDADLIEANL NS5A 2221-2231 37 42 102 0 8 4 0 2 2
2252-2260 ILDSFDPLR NS5A 2252-2260 34 0 37 0 30 8 0 3 8
NS5B 2578-2587 RLIVFPDLGV NS5B 2578-2587 100 49 234 116 305 12 41 33 46
2594-2602 ALYDVVSTL NS5B 2594-2602 80 39 261 331 326 0 81 44 2
2727-2735 KLQDCTMLV NS5B 2727-2735 99 25 255 277 297 13 38 52 60
a

Percent inhibition of binding of the FLP-control peptide onto purified HLA.A2.1 molecules for a ratio competitor peptide/control peptide = 30.

b

ND, not done. Mc, control mouse; M1, M2, and M3, immunized mice.

c

Percent specific lysis at an E:T ratio of 1:33.