TABLE 2.
Lipid binding constants for W26,113L determined from fluorescence quenching plots
Lipid | Annular sites on extracellular side Relative binding constant | Nonannular sites Binding constant (mol fraction−1) | Annular sites on intracellular side Relative binding constant |
---|---|---|---|
Phosphatidic acid | 0.80 ± 0.17 | 4.6 ± 2.1 | 2.93 ± 0.77 |
Phosphatidylglycerol | 0.68 ± 0.07 | 3.0 ± 0.7 | 1.88 ± 0.10 |
Phosphatidylserine | 0.94 ± 0.11 | 7.1 ± 2.7 | 0.70 ± 0.30 |
Cardiolipin | 0.77 ± 0.10 | 7.3 ± 1.2 | 0.70 ± 0.16 |
Annular lipid binding constants relative to di(C18:1)PC on the extracellular side were determined by fitting quenching data for W26,113L to Eq. 4 using a value for n of 1.69. Nonannular lipid binding constants were determined by fitting quenching data for W26,113L to Eq. 9 using the values for the relative binding constant at the annular sites given in the table with a value for n of 1.69 for all lipids except phosphatidic acid for which n = 2.49 (15). Annular lipid binding constants relative to di(C18:1)PC on the intracellular side were determined by fitting quenching data for wild-type KcsA to Eq. 10. The mol fraction of cardiolipin was calculated on a chain basis, to account for the fact that cardiolipin contains four fatty acyl chains whereas phosphatidylcholine contains only two.