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. 2005 Oct 7;90(1):42–56. doi: 10.1529/biophysj.105.071944

FIGURE 8.

FIGURE 8

Active site of the ternary complex (pol X-DNA-dCTP) (a) before and (b) after 10.5 ns of molecular dynamics (simulation 7). (c) Coordination spheres for the catalytic (A) and nucleotide binding (B) magnesium ions at the end of the dynamics trajectory.